Variant report

Variant	rs16939632
Chromosome Location	chr8:79067379-79067380
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs16905564	1.00[AMR][1000 genomes]
rs16905595	1.00[AMR][1000 genomes]
rs7000719	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73247005	1.00[AMR][1000 genomes]
rs73247026	1.00[AMR][1000 genomes]
rs73248945	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73250878	1.00[AMR][1000 genomes]
rs73250879	1.00[AMR][1000 genomes]
rs73252342	1.00[AMR][1000 genomes]
rs73252344	1.00[AMR][1000 genomes]
rs73252346	1.00[AMR][1000 genomes]
rs7832285	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831364	chr8:79034769-79223319	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:79067200-79070400	Weak transcription	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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