Variant report

Variant	rs73247005
Chromosome Location	chr8:78986563-78986564
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs16905564	1.00[AMR][1000 genomes]
rs16905595	1.00[AMR][1000 genomes]
rs16939632	1.00[AMR][1000 genomes]
rs7000719	1.00[AMR][1000 genomes]
rs73245814	1.00[AMR][1000 genomes]
rs73247026	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73248945	1.00[AMR][1000 genomes]
rs73250878	1.00[AMR][1000 genomes]
rs73250879	1.00[AMR][1000 genomes]
rs73252342	1.00[AMR][1000 genomes]
rs73252344	1.00[AMR][1000 genomes]
rs73252346	1.00[AMR][1000 genomes]
rs7832285	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752267	chr8:78661586-78995994	Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv1034645	chr8:78782998-78996230	Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:78986000-78987000	Enhancers	Rectal Smooth Muscle	rectum

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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