Variant report

Variant rs16977353
Chromosome Location chr15:57550549-57550550
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57511800-57551600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr15:57511800-57565000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr15:57520400-57576000 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr15:57522400-57565400 Weak transcription Spleen Spleen
5 chr15:57522800-57585000 Strong transcription Fetal Thymus thymus
6 chr15:57525600-57556800 Weak transcription Pancreas Pancrea
7 chr15:57526600-57554400 Weak transcription Rectal Smooth Muscle rectum
8 chr15:57526600-57574200 Weak transcription Hela-S3 cervix
9 chr15:57526800-57554200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr15:57528400-57554800 Weak transcription NHEK skin
11 chr15:57530800-57551200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr15:57533600-57568800 Weak transcription Pancreatic Islets Pancreatic Islet
13 chr15:57536800-57574200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr15:57537800-57551600 Weak transcription Brain Germinal Matrix brain
15 chr15:57537800-57551800 Weak transcription Small Intestine intestine
16 chr15:57537800-57555200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:57537800-57598200 Weak transcription Colonic Mucosa Colon
18 chr15:57538400-57551800 Weak transcription Stomach Mucosa stomach
19 chr15:57538400-57564800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr15:57538600-57551800 Weak transcription Brain Cingulate Gyrus brain
21 chr15:57538800-57554200 Weak transcription Fetal Brain Female brain
22 chr15:57539400-57554400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr15:57539400-57574800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr15:57539600-57551400 Weak transcription Brain Anterior Caudate brain
25 chr15:57539600-57556800 Weak transcription Gastric stomach
26 chr15:57539600-57565200 Weak transcription Aorta Aorta
27 chr15:57539600-57565200 Weak transcription Esophagus oesophagus
28 chr15:57540000-57554400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr15:57540200-57551800 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr15:57540200-57555000 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr15:57540600-57551800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr15:57540600-57556800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr15:57540600-57557000 Weak transcription Lung lung
34 chr15:57540600-57565400 Weak transcription Ovary ovary
35 chr15:57542600-57550600 Strong transcription Monocytes-CD14+_RO01746 blood
36 chr15:57543000-57556400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr15:57543200-57565200 Weak transcription Right Ventricle heart
38 chr15:57543400-57550600 Strong transcription Primary T cells from cord blood blood
39 chr15:57544400-57550800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr15:57544400-57551600 Weak transcription Brain Hippocampus Middle brain
41 chr15:57544400-57551600 Weak transcription Brain Inferior Temporal Lobe brain
42 chr15:57544400-57551800 Weak transcription Brain Angular Gyrus brain
43 chr15:57544600-57574800 Weak transcription Fetal Brain Male brain
44 chr15:57544800-57551200 Strong transcription HSMM muscle
45 chr15:57545400-57550600 Strong transcription Fetal Muscle Leg muscle
46 chr15:57545600-57550600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr15:57545800-57551400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr15:57545800-57551600 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr15:57545800-57551600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr15:57545800-57554400 Weak transcription Primary T killer memory cells from peripheral blood blood

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