The 2.0 version of rSNPBase

Variant report

Variant rs16977357
Chromosome Location chr15:57552737-57552738
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57511800-57565000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr15:57520400-57576000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr15:57522400-57565400 Weak transcription Spleen Spleen
4 chr15:57522800-57585000 Strong transcription Fetal Thymus thymus
5 chr15:57525600-57556800 Weak transcription Pancreas Pancrea
6 chr15:57526600-57554400 Weak transcription Rectal Smooth Muscle rectum
7 chr15:57526600-57574200 Weak transcription Hela-S3 cervix
8 chr15:57526800-57554200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:57528400-57554800 Weak transcription NHEK skin
10 chr15:57533600-57568800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr15:57536800-57574200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr15:57537800-57555200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr15:57537800-57598200 Weak transcription Colonic Mucosa Colon
14 chr15:57538400-57564800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr15:57538800-57554200 Weak transcription Fetal Brain Female brain
16 chr15:57539400-57554400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr15:57539400-57574800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr15:57539600-57556800 Weak transcription Gastric stomach
19 chr15:57539600-57565200 Weak transcription Aorta Aorta
20 chr15:57539600-57565200 Weak transcription Esophagus oesophagus
21 chr15:57540000-57554400 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr15:57540200-57555000 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr15:57540600-57556800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr15:57540600-57557000 Weak transcription Lung lung
25 chr15:57540600-57565400 Weak transcription Ovary ovary
26 chr15:57543000-57556400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr15:57543200-57565200 Weak transcription Right Ventricle heart
28 chr15:57544600-57574800 Weak transcription Fetal Brain Male brain
29 chr15:57545800-57554400 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr15:57545800-57554400 Weak transcription HMEC breast
31 chr15:57545800-57554600 Weak transcription Colon Smooth Muscle Colon
32 chr15:57545800-57565200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr15:57546000-57553800 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr15:57546000-57554400 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr15:57546000-57554400 Weak transcription Rectal Mucosa Donor 29 rectum
36 chr15:57546000-57554400 Weak transcription A549 lung
37 chr15:57546000-57580600 Weak transcription Placenta Amnion Placenta Amnion
38 chr15:57546200-57554200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr15:57546600-57553600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr15:57546600-57553800 Weak transcription Primary hematopoietic stem cells blood
41 chr15:57546600-57554200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr15:57546600-57554400 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr15:57546600-57554400 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr15:57546800-57554200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr15:57546800-57554400 Weak transcription GM12878-XiMat blood
46 chr15:57547000-57554200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr15:57548200-57556400 Weak transcription Fetal Stomach stomach
48 chr15:57548200-57578000 Weak transcription Fetal Heart heart
49 chr15:57548400-57553200 Weak transcription Primary T helper cells fromperipheralblood blood
50 chr15:57548400-57554200 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015