The 2.0 version of rSNPBase

Variant report

Variant rs8039780
Chromosome Location chr15:57449574-57449575
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57439000-57463400 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr15:57439400-57456000 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr15:57439400-57491600 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr15:57440800-57450400 Weak transcription Aorta Aorta
5 chr15:57441200-57450800 Weak transcription Esophagus oesophagus
6 chr15:57442400-57450400 Weak transcription Ovary ovary
7 chr15:57442600-57450600 Weak transcription Gastric stomach
8 chr15:57444200-57456600 Strong transcription Fetal Thymus thymus
9 chr15:57444400-57449800 Weak transcription Left Ventricle heart
10 chr15:57444400-57450400 Weak transcription Thymus Thymus
11 chr15:57444400-57450800 Weak transcription Fetal Stomach stomach
12 chr15:57444400-57459000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr15:57444400-57459200 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr15:57444400-57485600 Weak transcription Placenta Placenta
15 chr15:57444400-57507400 Weak transcription K562 blood
16 chr15:57444600-57450000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr15:57444600-57450600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr15:57444600-57450600 Weak transcription NH-A brain
19 chr15:57444600-57451400 Weak transcription Fetal Intestine Small intestine
20 chr15:57444600-57452800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr15:57444600-57455600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
22 chr15:57444600-57458000 Weak transcription Dnd41 blood
23 chr15:57444600-57458400 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr15:57444600-57459000 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr15:57444600-57459600 Weak transcription Liver Liver
26 chr15:57444600-57490200 Weak transcription Primary T helper cells PMA-I stimulated --
27 chr15:57444800-57450400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr15:57444800-57458600 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr15:57444800-57458800 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr15:57444800-57458800 Weak transcription Primary hematopoietic stem cells blood
31 chr15:57444800-57484200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr15:57444800-57484200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr15:57445000-57450800 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr15:57445000-57455600 Weak transcription Primary T cells from cord blood blood
35 chr15:57445000-57461600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr15:57445200-57450600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr15:57445200-57452400 Weak transcription Fetal Intestine Large intestine
38 chr15:57445200-57466000 Weak transcription Primary T helper naive cells from peripheral blood blood
39 chr15:57445400-57458800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr15:57445400-57478400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr15:57445600-57450200 Weak transcription A549 lung
42 chr15:57445600-57450600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr15:57445600-57450600 Weak transcription Small Intestine intestine
44 chr15:57445600-57450800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr15:57445600-57455800 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr15:57445600-57458800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr15:57445600-57459000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr15:57445600-57461400 Weak transcription Primary B cells from peripheral blood blood
49 chr15:57445800-57450600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr15:57445800-57450600 Weak transcription HMEC breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015