The 2.0 version of rSNPBase

Variant report

Variant rs16977180
Chromosome Location chr15:57284120-57284121
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57269800-57304800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:57273000-57285800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr15:57273000-57307200 Weak transcription Fetal Intestine Small intestine
4 chr15:57274000-57287600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr15:57274200-57289200 Weak transcription Fetal Muscle Leg muscle
6 chr15:57274200-57295600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr15:57275400-57306200 Weak transcription Duodenum Mucosa Duodenum
8 chr15:57276200-57289200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr15:57276200-57313400 Weak transcription Primary T cells fromperipheralblood blood
10 chr15:57276600-57288000 Weak transcription Aorta Aorta
11 chr15:57276800-57288600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr15:57277000-57285400 Weak transcription Fetal Intestine Large intestine
13 chr15:57277000-57313400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr15:57277600-57287600 Weak transcription Brain Germinal Matrix brain
15 chr15:57277800-57285000 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr15:57278000-57285400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr15:57278600-57295400 Weak transcription NH-A brain
18 chr15:57279400-57300000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
19 chr15:57279600-57301800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr15:57279800-57300200 Weak transcription Psoas Muscle Psoas
21 chr15:57280600-57286800 Weak transcription Fetal Brain Male brain
22 chr15:57280600-57294000 Weak transcription HSMMtube muscle
23 chr15:57281200-57287600 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr15:57281600-57285600 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr15:57282000-57284800 Weak transcription Cortex derived primary cultured neurospheres brain
26 chr15:57282000-57285000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr15:57282000-57285000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr15:57282000-57285000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr15:57282000-57285200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr15:57282000-57285200 Weak transcription Primary hematopoietic stem cells blood
31 chr15:57282000-57285400 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr15:57282000-57285400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr15:57282000-57285400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr15:57282000-57285600 Weak transcription iPS-18 Cell Line embryonic stem cell
35 chr15:57282000-57289200 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr15:57282000-57289800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr15:57282000-57295400 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr15:57282000-57295400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr15:57282000-57295600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr15:57282000-57307400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr15:57282000-57315000 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr15:57282200-57284200 Weak transcription Primary monocytes fromperipheralblood blood
43 chr15:57282200-57284200 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr15:57282200-57285000 Weak transcription Primary B cells from cord blood blood
45 chr15:57282200-57285400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
46 chr15:57282200-57285400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr15:57282200-57285400 Weak transcription Fetal Lung lung
48 chr15:57282200-57285400 Weak transcription HSMM muscle
49 chr15:57282200-57285600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr15:57282200-57285600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015