The 2.0 version of rSNPBase

Variant report

Variant rs2733302
Chromosome Location chr15:57487988-57487989
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57439400-57491600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr15:57444400-57507400 Weak transcription K562 blood
3 chr15:57444600-57490200 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr15:57450800-57491000 Weak transcription Left Ventricle heart
5 chr15:57451000-57490800 Weak transcription NHEK skin
6 chr15:57451200-57490400 Weak transcription Ovary ovary
7 chr15:57451600-57491200 Weak transcription Rectal Smooth Muscle rectum
8 chr15:57452400-57490400 Weak transcription Fetal Brain Female brain
9 chr15:57453800-57524600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr15:57457200-57499400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr15:57458200-57505200 Strong transcription Fetal Thymus thymus
12 chr15:57459200-57488600 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr15:57459200-57492600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr15:57459800-57490200 Weak transcription HSMMtube muscle
15 chr15:57463800-57489200 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr15:57469000-57488600 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr15:57473600-57491200 Weak transcription Gastric stomach
18 chr15:57475800-57491000 Weak transcription Colon Smooth Muscle Colon
19 chr15:57476200-57490200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr15:57476200-57490400 Weak transcription HUVEC blood vessel
21 chr15:57476200-57491200 Weak transcription Stomach Smooth Muscle stomach
22 chr15:57476800-57490000 Weak transcription Small Intestine intestine
23 chr15:57477000-57492800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr15:57477200-57491000 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr15:57477600-57490000 Weak transcription Brain Angular Gyrus brain
26 chr15:57478200-57493200 Weak transcription HepG2 liver
27 chr15:57478600-57494000 Weak transcription Pancreas Pancrea
28 chr15:57478800-57490000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr15:57478800-57490800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr15:57478800-57526200 Weak transcription Hela-S3 cervix
31 chr15:57479000-57490400 Weak transcription NH-A brain
32 chr15:57479200-57490000 Weak transcription Brain Germinal Matrix brain
33 chr15:57479400-57490800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr15:57479400-57491000 Weak transcription HSMM muscle
35 chr15:57479400-57524800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:57481400-57490200 Weak transcription Aorta Aorta
37 chr15:57481800-57524600 Weak transcription Right Ventricle heart
38 chr15:57482400-57491200 Weak transcription Fetal Brain Male brain
39 chr15:57483000-57488200 Weak transcription H1 Cell Line embryonic stem cell
40 chr15:57483000-57493800 Weak transcription Colonic Mucosa Colon
41 chr15:57483200-57490200 Weak transcription GM12878-XiMat blood
42 chr15:57483400-57488200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr15:57483400-57488400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr15:57484000-57488000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr15:57484200-57488200 Strong transcription Fetal Intestine Large intestine
46 chr15:57484200-57488200 Strong transcription Fetal Muscle Leg muscle
47 chr15:57484200-57488800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr15:57484200-57488800 Strong transcription Dnd41 blood
49 chr15:57484400-57488800 Strong transcription Primary monocytes fromperipheralblood blood
50 chr15:57484600-57493200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015