The 2.0 version of rSNPBase

Variant report

Variant rs16986390
Chromosome Location chr22:28809594-28809595
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28793000-28814000 Weak transcription Left Ventricle heart
2 chr22:28793000-28819800 Weak transcription Fetal Intestine Small intestine
3 chr22:28798400-28809800 Weak transcription Fetal Lung lung
4 chr22:28798800-28821200 Weak transcription Dnd41 blood
5 chr22:28801000-28810000 Weak transcription Fetal Kidney kidney
6 chr22:28804600-28810000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr22:28805200-28809600 Weak transcription Fetal Stomach stomach
8 chr22:28805200-28810400 Weak transcription Fetal Brain Male brain
9 chr22:28806200-28813000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr22:28806600-28809800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr22:28806600-28809800 Weak transcription HSMMtube muscle
12 chr22:28806600-28810000 Weak transcription NHLF lung
13 chr22:28806800-28809800 Weak transcription Brain Substantia Nigra brain
14 chr22:28806800-28809800 Weak transcription HUVEC blood vessel
15 chr22:28806800-28810000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr22:28806800-28815400 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr22:28806800-28815800 Weak transcription ES-I3 Cell Line embryonic stem cell
18 chr22:28807200-28809800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr22:28807400-28809600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr22:28807400-28821200 Weak transcription Hela-S3 cervix
21 chr22:28807600-28809800 Weak transcription NHDF-Ad bronchial
22 chr22:28807600-28810000 Weak transcription Muscle Satellite Cultured Cells --
23 chr22:28807600-28810600 Weak transcription Brain Angular Gyrus brain
24 chr22:28807600-28814000 Weak transcription Brain Germinal Matrix brain
25 chr22:28807800-28809800 Weak transcription Adipose Nuclei Adipose
26 chr22:28807800-28809800 Weak transcription Colon Smooth Muscle Colon
27 chr22:28807800-28809800 Weak transcription Rectal Smooth Muscle rectum
28 chr22:28807800-28810000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr22:28808000-28809800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr22:28808000-28809800 Weak transcription Osteobl bone
31 chr22:28808200-28809600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr22:28808400-28809600 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr22:28808400-28821400 Weak transcription Gastric stomach
34 chr22:28808400-28821800 Weak transcription Psoas Muscle Psoas
35 chr22:28808600-28810000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr22:28808600-28810200 Weak transcription Ovary ovary
37 chr22:28808800-28810000 Weak transcription Cortex derived primary cultured neurospheres brain
38 chr22:28808800-28810200 Weak transcription Fetal Brain Female brain
39 chr22:28808800-28810200 Weak transcription Right Atrium heart
40 chr22:28808800-28813000 Weak transcription Aorta Aorta
41 chr22:28809200-28810000 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015