Variant report

Variant rs16986814
Chromosome Location chr22:29293208-29293209
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:29281400-29294600 Weak transcription Muscle Satellite Cultured Cells --
2 chr22:29281400-29295200 Weak transcription Brain Hippocampus Middle brain
3 chr22:29282200-29295000 Weak transcription Brain Substantia Nigra brain
4 chr22:29283400-29294200 Weak transcription Aorta Aorta
5 chr22:29283400-29299000 Weak transcription Fetal Stomach stomach
6 chr22:29286000-29299000 Weak transcription Ovary ovary
7 chr22:29286800-29297800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr22:29288000-29301800 Weak transcription Pancreatic Islets Pancreatic Islet
9 chr22:29288400-29295000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr22:29288400-29299000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr22:29288400-29299000 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr22:29288600-29293600 Weak transcription Liver Liver
13 chr22:29288600-29294600 Weak transcription Colon Smooth Muscle Colon
14 chr22:29288600-29295000 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr22:29288600-29296200 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr22:29288600-29298600 Weak transcription Stomach Smooth Muscle stomach
17 chr22:29290000-29296800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr22:29290800-29294200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
19 chr22:29290800-29294400 Weak transcription Brain Inferior Temporal Lobe brain
20 chr22:29290800-29295000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr22:29290800-29298400 Weak transcription Fetal Muscle Leg muscle
22 chr22:29290800-29298600 Weak transcription Duodenum Mucosa Duodenum
23 chr22:29290800-29299000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr22:29291000-29295000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr22:29291000-29295000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr22:29291000-29295200 Weak transcription Primary monocytes fromperipheralblood blood
27 chr22:29291200-29294800 Strong transcription Fetal Intestine Small intestine
28 chr22:29291200-29295200 Weak transcription Monocytes-CD14+_RO01746 blood
29 chr22:29291200-29300600 Weak transcription Psoas Muscle Psoas
30 chr22:29291400-29295800 Weak transcription Esophagus oesophagus
31 chr22:29291400-29298400 Weak transcription Fetal Intestine Large intestine
32 chr22:29291800-29294400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr22:29291800-29294400 Enhancers H9 Cell Line embryonic stem cell
34 chr22:29292000-29299000 Weak transcription Right Atrium heart
35 chr22:29292400-29293600 Enhancers Primary neutrophils fromperipheralblood blood
36 chr22:29292400-29293800 Enhancers Primary hematopoietic stem cells short term culture blood
37 chr22:29292400-29294000 Enhancers Primary B cells from peripheral blood blood
38 chr22:29292400-29295000 Enhancers NHEK skin
39 chr22:29292400-29296400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr22:29292400-29296600 Genic enhancers HepG2 liver
41 chr22:29292400-29297600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr22:29292400-29297600 Enhancers HMEC breast
43 chr22:29292400-29300600 Enhancers Breast Myoepithelial Primary Cells Breast
44 chr22:29292600-29293400 Enhancers Primary B cells from cord blood blood
45 chr22:29292600-29293400 Enhancers Brain Cingulate Gyrus brain
46 chr22:29292600-29293400 Enhancers Placenta Placenta
47 chr22:29292600-29293400 Enhancers HSMM muscle
48 chr22:29292600-29293400 Enhancers HSMMtube muscle
49 chr22:29292600-29293800 Enhancers ES-WA7 Cell Line embryonic stem cell
50 chr22:29292600-29293800 Enhancers iPS-18 Cell Line embryonic stem cell

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