Variant report

Variant	rs17007018
Chromosome Location	chr4:120790617-120790618
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11098544	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2304801	0.86[EUR][1000 genomes]
rs56036619	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56038013	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs56234746	0.86[EUR][1000 genomes]
rs72682827	0.86[EUR][1000 genomes]
rs72682828	0.86[EUR][1000 genomes]
rs72682832	0.86[EUR][1000 genomes]
rs72682843	0.86[EUR][1000 genomes]
rs72682844	0.86[EUR][1000 genomes]
rs72682845	0.86[EUR][1000 genomes]
rs72682877	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72682882	0.87[ASN][1000 genomes]
rs72682884	0.80[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72682885	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72682891	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72682897	0.86[EUR][1000 genomes]
rs72682898	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72682901	0.86[EUR][1000 genomes]
rs72682902	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72684508	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72684509	0.86[EUR][1000 genomes]
rs72684511	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72684514	0.86[EUR][1000 genomes]
rs72684533	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72684534	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532739	chr4:120392824-121098103	Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:120758600-120794000	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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