Variant report

Variant	rs17033627
Chromosome Location	chr12:103654649-103654650
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10507162	0.85[JPT][hapmap];0.81[AMR][1000 genomes]
rs10860976	1.00[CEU][hapmap];0.90[CHB][hapmap];0.96[CHD][hapmap];0.89[GIH][hapmap];0.92[JPT][hapmap];0.88[LWK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10860979	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10860981	1.00[CEU][hapmap];0.92[CHB][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10860982	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11111517	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];0.88[LWK][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap];0.87[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11111520	1.00[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];1.00[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11111522	1.00[CEU][hapmap];0.92[CHB][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111525	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111527	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111528	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111529	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.94[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111530	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.89[GIH][hapmap];0.92[JPT][hapmap];0.90[MEX][hapmap];0.88[TSI][hapmap];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111531	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111532	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11111535	0.92[CHB][hapmap];0.93[CHD][hapmap];0.82[GIH][hapmap];0.83[JPT][hapmap]
rs12227177	0.92[CHB][hapmap];0.93[CHD][hapmap];0.83[GIH][hapmap];0.83[JPT][hapmap]
rs12228711	1.00[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12229038	0.92[CHB][hapmap];0.93[CHD][hapmap];0.83[GIH][hapmap];0.83[JPT][hapmap]
rs12230008	0.92[CHB][hapmap];0.92[JPT][hapmap]
rs12320837	0.85[CEU][hapmap];1.00[YRI][hapmap]
rs1520189	0.85[JPT][hapmap]
rs1554394	1.00[CHB][hapmap];0.92[JPT][hapmap]
rs17033705	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.89[GIH][hapmap];0.92[JPT][hapmap];1.00[MEX][hapmap];0.88[TSI][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2139557	0.89[GIH][hapmap];0.85[JPT][hapmap];1.00[MEX][hapmap];0.94[TSI][hapmap]
rs4144505	0.92[CHB][hapmap];0.92[JPT][hapmap]
rs4147493	0.92[CHB][hapmap];0.93[CHD][hapmap];0.83[GIH][hapmap];0.83[JPT][hapmap]
rs4764731	1.00[CEU][hapmap];0.90[CHB][hapmap];0.88[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4764950	0.92[CHB][hapmap];0.91[JPT][hapmap];0.85[ASN][1000 genomes]
rs57342939	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs58616642	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59259889	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6539067	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7132491	0.91[CHB][hapmap]
rs7294776	1.00[CEU][hapmap];0.92[CHB][hapmap];0.96[CHD][hapmap];0.92[JPT][hapmap];0.88[TSI][hapmap];0.93[EUR][1000 genomes]
rs7954263	1.00[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7975056	1.00[CEU][hapmap];0.92[CHB][hapmap];0.92[JPT][hapmap];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes]

No data

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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