Variant report

No.	Distal block	Cell Line	Cell type
1	chr3:17726443..17728457-chr3:17731343..17734227,2	K562	blood:
2	chr3:17710199..17712453-chr3:17724629..17727105,2	MCF-7	breast:
3	chr3:17725117..17727704-chr3:17732645..17734795,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:7)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1013069	chr3:17560456-17783372	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv1849856	chr3:17646794-17748688	Strong transcription Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv1828838	chr3:17646794-17757960	Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv999594	chr3:17690416-17982318	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:17707000-17734800	Weak transcription	Primary T helper cells fromperipheralblood	blood
2	chr3:17709200-17732000	Weak transcription	Psoas Muscle	Psoas
3	chr3:17711400-17755000	Weak transcription	Primary B cells from peripheral blood	blood
4	chr3:17712600-17732600	Weak transcription	Primary hematopoietic stem cells	blood
5	chr3:17720000-17727600	Weak transcription	Brain Substantia Nigra	brain
6	chr3:17720000-17747400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr3:17720200-17734200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr3:17720600-17734400	Weak transcription	Dnd41	blood
9	chr3:17723400-17735200	Weak transcription	Gastric	stomach
10	chr3:17723600-17728200	Weak transcription	Aorta	Aorta
11	chr3:17723600-17734400	Weak transcription	Primary B cells from cord blood	blood
12	chr3:17723600-17736000	Weak transcription	Pancreas	Pancrea
13	chr3:17723600-17736800	Weak transcription	Ovary	ovary
14	chr3:17724400-17727200	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr3:17724600-17734800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr3:17725600-17729000	Weak transcription	Small Intestine	intestine
17	chr3:17725800-17727600	Weak transcription	Brain Anterior Caudate	brain
18	chr3:17725800-17734400	Weak transcription	A549	lung
19	chr3:17726600-17734200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr3:17726800-17742200	Weak transcription	Stomach Mucosa	stomach

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