Variant report

Variant	rs17047626
Chromosome Location	chr3:68448693-68448694
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs17047573	1.00[TSI][hapmap]
rs17047585	0.86[EUR][1000 genomes]
rs17047586	1.00[TSI][hapmap];0.86[EUR][1000 genomes]
rs17047599	0.93[CHB][hapmap];0.89[JPT][hapmap]
rs17047602	0.93[CHB][hapmap];0.89[JPT][hapmap]
rs17047624	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs17047742	1.00[TSI][hapmap]
rs17047788	1.00[TSI][hapmap]
rs2202976	1.00[TSI][hapmap]
rs6771965	1.00[TSI][hapmap]
rs6772010	1.00[TSI][hapmap]
rs72912926	0.93[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs72912928	0.92[ASN][1000 genomes]
rs72912960	0.87[AFR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834721	chr3:68365963-68526394	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv998582	chr3:68422687-68461190	Enhancers ZNF genes & repeats Active TSS Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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