Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10514723	0.91[CHB][hapmap];0.94[JPT][hapmap]
rs11713541	0.81[YRI][hapmap]
rs11925200	0.91[CHB][hapmap];0.94[JPT][hapmap]
rs17047573	1.00[TSI][hapmap]
rs17047586	1.00[TSI][hapmap]
rs17047626	1.00[TSI][hapmap]
rs17047708	0.80[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17047742	1.00[CHB][hapmap];0.96[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17047774	0.90[CHB][hapmap];0.93[CHD][hapmap];1.00[GIH][hapmap];0.94[JPT][hapmap];0.85[YRI][hapmap];0.91[ASN][1000 genomes]
rs17047788	1.00[TSI][hapmap]
rs2036811	0.88[ASN][1000 genomes]
rs2036812	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4855488	0.87[YRI][hapmap]
rs56064707	0.90[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs56285685	1.00[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs59001415	0.92[ASN][1000 genomes]
rs6771965	0.84[ASW][hapmap];0.84[JPT][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap]
rs6772010	1.00[TSI][hapmap];0.88[YRI][hapmap]
rs6804619	0.90[CHB][hapmap];0.94[JPT][hapmap]
rs6809703	0.88[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72921003	0.98[ASN][1000 genomes]
rs73837656	0.96[ASN][1000 genomes]
rs7433109	1.00[TSI][hapmap]
rs907081	0.88[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv876927	chr3:68505398-68544442	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv876928	chr3:68505398-68551172	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv876929	chr3:68508137-68565824	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68523000-68531600	Weak transcription	Colon Smooth Muscle	Colon

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