Variant report

Variant	rs6804619
Chromosome Location	chr3:68559695-68559696
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10514723	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs11925200	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17047708	0.94[JPT][hapmap]
rs17047742	0.90[CHB][hapmap];0.94[JPT][hapmap];0.88[ASN][1000 genomes]
rs17047774	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs2036811	0.83[YRI][hapmap];0.84[ASN][1000 genomes]
rs2036812	0.86[ASN][1000 genomes]
rs2202976	0.90[CHB][hapmap];0.94[JPT][hapmap];0.92[ASN][1000 genomes]
rs56064707	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56285685	0.82[ASN][1000 genomes]
rs59001415	0.88[ASN][1000 genomes]
rs6771965	0.94[JPT][hapmap]
rs6809703	0.93[ASN][1000 genomes]
rs72921003	0.94[ASN][1000 genomes]
rs73837656	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv876929	chr3:68508137-68565824	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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