Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10433502	0.91[YRI][hapmap]
rs10514723	0.94[JPT][hapmap]
rs11914870	0.91[YRI][hapmap]
rs11925200	0.94[JPT][hapmap]
rs1510363	0.83[YRI][hapmap]
rs17047654	0.88[YRI][hapmap]
rs17047668	0.87[YRI][hapmap]
rs17047742	0.80[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17047774	0.94[JPT][hapmap]
rs1995878	0.88[AFR][1000 genomes]
rs2036811	0.87[ASN][1000 genomes]
rs2036812	1.00[EUR][1000 genomes]
rs2202976	0.80[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs56285685	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59001415	0.89[ASN][1000 genomes]
rs6549127	0.91[YRI][hapmap]
rs6771965	0.83[JPT][hapmap]
rs6804619	0.94[JPT][hapmap]
rs6809703	1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72921003	0.81[ASN][1000 genomes]
rs9683295	0.92[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834721	chr3:68365963-68526394	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1003779	chr3:68470899-68517125	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68475000-68479400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr3:68477800-68487400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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