Variant report
Variant | rs4855488 |
---|---|
Chromosome Location | chr3:68563209-68563210 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10514723 | 0.84[YRI][hapmap] |
rs11713541 | 0.86[YRI][hapmap] |
rs12488594 | 0.94[CEU][hapmap] |
rs12633931 | 0.94[CEU][hapmap] |
rs17047774 | 0.92[YRI][hapmap] |
rs17047798 | 0.94[CEU][hapmap] |
rs1912458 | 0.90[EUR][1000 genomes] |
rs2136717 | 0.81[EUR][1000 genomes] |
rs2202976 | 0.87[YRI][hapmap] |
rs35845454 | 0.84[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs4389487 | 0.82[EUR][1000 genomes] |
rs4855474 | 0.85[JPT][hapmap] |
rs4855475 | 0.86[JPT][hapmap] |
rs4855480 | 0.83[CEU][hapmap] |
rs4855483 | 0.94[CEU][hapmap];0.84[EUR][1000 genomes] |
rs4855489 | 0.94[CEU][hapmap] |
rs6771965 | 0.92[YRI][hapmap] |
rs6772010 | 1.00[YRI][hapmap] |
rs6778185 | 0.83[CEU][hapmap];0.83[EUR][1000 genomes] |
rs6801913 | 0.89[CEU][hapmap];0.80[JPT][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes] |
rs6809703 | 0.81[YRI][hapmap] |
rs73092844 | 0.88[EUR][1000 genomes] |
rs73092847 | 0.88[EUR][1000 genomes] |
rs73092848 | 0.89[EUR][1000 genomes] |
rs73092849 | 0.89[EUR][1000 genomes] |
rs907081 | 0.82[YRI][hapmap] |
rs956352 | 0.83[CEU][hapmap];0.81[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv1832396 | chr3:68478762-68641509 | Enhancers Weak transcription ZNF genes & repeats Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
2 | nsv876929 | chr3:68508137-68565824 | ZNF genes & repeats Enhancers Weak transcription | Chromatin interactive region | n/a | inside rSNPs | diseases |
No data |