Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs12488594	0.95[CEU][hapmap]
rs12633931	0.95[CEU][hapmap];0.93[GIH][hapmap];0.94[TSI][hapmap]
rs17047798	0.95[CEU][hapmap]
rs1912458	0.89[EUR][1000 genomes]
rs2136717	0.84[EUR][1000 genomes]
rs35845454	0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4389487	0.84[EUR][1000 genomes]
rs4634123	0.86[GIH][hapmap];0.88[TSI][hapmap]
rs4855475	0.81[JPT][hapmap]
rs4855480	0.90[CEU][hapmap];0.81[EUR][1000 genomes]
rs4855482	0.86[GIH][hapmap];0.94[TSI][hapmap]
rs4855483	0.94[CEU][hapmap];0.84[EUR][1000 genomes]
rs4855488	0.89[CEU][hapmap];0.80[JPT][hapmap]
rs4855489	0.95[CEU][hapmap];0.93[GIH][hapmap];0.94[TSI][hapmap]
rs6778185	0.95[CEU][hapmap];0.88[GIH][hapmap];0.97[TSI][hapmap];0.86[EUR][1000 genomes]
rs73092834	0.82[EUR][1000 genomes]
rs73092844	0.88[EUR][1000 genomes]
rs73092847	0.88[EUR][1000 genomes]
rs73092848	0.87[EUR][1000 genomes]
rs73092849	0.87[EUR][1000 genomes]
rs7653487	0.83[EUR][1000 genomes]
rs956352	0.90[CEU][hapmap];0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1832396	chr3:68478762-68641509	Enhancers Weak transcription ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv876927	chr3:68505398-68544442	Weak transcription Enhancers ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv876928	chr3:68505398-68551172	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv876929	chr3:68508137-68565824	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68529800-68532000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr3:68530400-68534600	Enhancers	Fetal Stomach	stomach
3	chr3:68531400-68533000	Enhancers	Fetal Lung	lung
4	chr3:68531600-68532400	Enhancers	Rectal Smooth Muscle	rectum
5	chr3:68531600-68533000	Enhancers	Colon Smooth Muscle	Colon

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