Variant report

Variant	rs17084352
Chromosome Location	chr5:94315978-94315979
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94311894..94314263-chr5:94314957..94317890,2	K562	blood:

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs152279	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs159011	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs159016	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs159019	1.00[CEU][hapmap];0.81[EUR][1000 genomes]
rs159021	0.81[EUR][1000 genomes]
rs168708	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[JPT][hapmap];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs293041	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs293042	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs293043	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs293045	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes]
rs32918	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs32919	1.00[CEU][hapmap];0.82[CHB][hapmap];0.88[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs32920	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs39624	1.00[CEU][hapmap]
rs463416	0.80[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs464308	0.82[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs464450	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs465671	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs465714	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs467322	0.94[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72777354	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs816871	1.00[CEU][hapmap];0.82[CHB][hapmap];0.90[JPT][hapmap];0.81[EUR][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94301200-94337600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr5:94305400-94316000	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr5:94306000-94317200	Weak transcription	HUVEC	blood vessel
4	chr5:94312200-94323000	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr5:94313600-94318800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr5:94313800-94337000	Weak transcription	Primary neutrophils fromperipheralblood	blood
7	chr5:94314000-94323200	Weak transcription	Monocytes-CD14+_RO01746	blood
8	chr5:94314000-94325400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr5:94314800-94323000	Weak transcription	Primary hematopoietic stem cells	blood

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