Variant report

Variant	rs463416
Chromosome Location	chr5:94302685-94302686
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94295406..94297881-chr5:94300417..94303103,2	K562	blood:

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs152279	0.85[CHB][hapmap];0.90[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs159011	0.85[CHB][hapmap];0.90[JPT][hapmap];0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs159012	0.87[ASN][1000 genomes]
rs159016	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs159019	0.88[EUR][1000 genomes]
rs159021	0.88[EUR][1000 genomes]
rs159023	0.81[ASN][1000 genomes]
rs168708	0.82[CHB][hapmap];0.88[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17084352	0.80[JPT][hapmap];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs293041	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs293042	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs293043	0.85[CHB][hapmap];0.90[JPT][hapmap];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs293045	0.85[CHB][hapmap];0.90[JPT][hapmap];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs32918	0.85[CHB][hapmap];0.90[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs32919	0.85[CHB][hapmap];0.88[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs32920	0.85[CHB][hapmap];0.90[JPT][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs456156	0.91[ASN][1000 genomes]
rs464308	0.85[CHB][hapmap];0.90[JPT][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs464450	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs465671	0.85[CHB][hapmap];0.90[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs465714	0.85[CHB][hapmap];0.90[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs467322	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72777354	0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs816871	0.85[CHB][hapmap];0.90[JPT][hapmap];0.91[AFR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs816873	0.85[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94289000-94304800	Weak transcription	HUVEC	blood vessel
2	chr5:94300400-94304400	Weak transcription	Brain Anterior Caudate	brain
3	chr5:94301200-94311000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr5:94301200-94337600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr5:94301600-94310800	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr5:94301800-94304400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr5:94301800-94310800	Weak transcription	Primary hematopoietic stem cells	blood

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