Variant report

Variant	rs17098697
Chromosome Location	chr14:32781355-32781356
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11624220	1.00[ASN][1000 genomes]
rs17388327	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1957010	1.00[CHB][hapmap]
rs1958364	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1958365	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs34186445	1.00[ASN][1000 genomes]
rs35176317	1.00[ASN][1000 genomes]
rs35312946	1.00[ASN][1000 genomes]
rs36004481	1.00[ASN][1000 genomes]
rs55688151	1.00[ASN][1000 genomes]
rs61981813	1.00[ASN][1000 genomes]
rs61981814	1.00[ASN][1000 genomes]
rs7140557	1.00[ASN][1000 genomes]
rs7157943	1.00[ASN][1000 genomes]
rs72664699	1.00[ASN][1000 genomes]
rs74043718	1.00[ASN][1000 genomes]
rs8012469	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv901594	chr14:32772850-32786268	Weak transcription Flanking Active TSS Enhancers Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32777000-32788000	Weak transcription	Esophagus	oesophagus
2	chr14:32777400-32791400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr14:32778000-32782600	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr14:32778400-32782600	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr14:32780000-32781400	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr14:32780400-32781400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr14:32780600-32781400	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr14:32780600-32781400	Enhancers	Fetal Muscle Leg	muscle
9	chr14:32780600-32781400	Enhancers	NHEK	skin
10	chr14:32780600-32781800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr14:32780600-32782000	Enhancers	Hela-S3	cervix
12	chr14:32780800-32781400	Enhancers	Left Ventricle	heart
13	chr14:32780800-32781400	Enhancers	HMEC	breast
14	chr14:32781000-32781600	Enhancers	HepG2	liver
15	chr14:32781200-32781400	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr14:32781200-32790600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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