Variant report

Variant	rs1957010
Chromosome Location	chr14:32891088-32891089
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1158841	1.00[CHB][hapmap]
rs11622988	1.00[AFR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1950703	1.00[CHB][hapmap]
rs1956221	1.00[CHB][hapmap]
rs4246975	1.00[CHB][hapmap]
rs6571526	1.00[ASN][1000 genomes]
rs7145886	1.00[CHB][hapmap]
rs8016916	1.00[CHB][hapmap]
rs910843	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32876800-32895800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr14:32886400-32891200	Weak transcription	Fetal Brain Female	brain
3	chr14:32887800-32891400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr14:32887800-32895800	Weak transcription	Left Ventricle	heart
5	chr14:32887800-32901800	Weak transcription	Ovary	ovary
6	chr14:32888000-32891400	Weak transcription	Osteobl	bone
7	chr14:32888800-32895200	Weak transcription	Brain Hippocampus Middle	brain
8	chr14:32888800-32895800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr14:32889600-32896000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr14:32890000-32895800	Weak transcription	Brain Angular Gyrus	brain
11	chr14:32890000-32895800	Weak transcription	Brain Cingulate Gyrus	brain
12	chr14:32890400-32891200	Enhancers	Brain Substantia Nigra	brain
13	chr14:32890800-32891200	Enhancers	Brain Inferior Temporal Lobe	brain
14	chr14:32890800-32892800	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr14:32891000-32891200	Weak transcription	Right Ventricle	heart
16	chr14:32891000-32891400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr14:32891000-32891400	Enhancers	NH-A	brain
18	chr14:32891000-32891600	Enhancers	HSMMtube	muscle
19	chr14:32891000-32895800	Weak transcription	Brain Anterior Caudate	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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