Variant report

Variant	rs910843
Chromosome Location	chr14:33059370-33059371
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1028536	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1158841	0.95[CEU][hapmap];1.00[CHB][hapmap];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11628548	1.00[ASN][1000 genomes]
rs1950703	1.00[CEU][hapmap];1.00[CHB][hapmap];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1956211	0.86[CEU][hapmap]
rs1956221	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1957010	1.00[CHB][hapmap]
rs4246975	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4462503	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs6571550	1.00[ASN][1000 genomes]
rs7145886	1.00[CEU][hapmap];1.00[CHB][hapmap];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8016916	1.00[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045035	chr14:32986003-33543227	Weak transcription Enhancers Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv542021	chr14:32986003-33543227	Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:33035400-33062600	Weak transcription	Aorta	Aorta
2	chr14:33046000-33063000	Weak transcription	Ovary	ovary
3	chr14:33046600-33061800	Weak transcription	Fetal Heart	heart
4	chr14:33054800-33059400	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr14:33057000-33060400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr14:33057000-33062000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr14:33057800-33078200	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr14:33058200-33059800	Enhancers	Skeletal Muscle Male	skeletal muscle
9	chr14:33058200-33060600	Enhancers	Psoas Muscle	Psoas
10	chr14:33058200-33067400	Enhancers	NHDF-Ad	bronchial
11	chr14:33058400-33062000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr14:33058600-33059400	Weak transcription	Fetal Muscle Leg	muscle
13	chr14:33058600-33060600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr14:33058600-33061600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr14:33058600-33061600	Weak transcription	Left Ventricle	heart
16	chr14:33058600-33062200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr14:33058600-33063800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr14:33058600-33063800	Weak transcription	Fetal Muscle Trunk	muscle
19	chr14:33058800-33061200	Weak transcription	HSMMtube	muscle
20	chr14:33059200-33062000	Weak transcription	Right Ventricle	heart
21	chr14:33059200-33062400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr14:33059200-33063600	Enhancers	Muscle Satellite Cultured Cells	--

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