Variant report

Variant	rs17098817
Chromosome Location	chr14:32814428-32814429
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10133184	1.00[MEX][hapmap]
rs10140712	1.00[MEX][hapmap]
rs10143997	0.90[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11847643	1.00[MEX][hapmap]
rs17098811	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17099064	1.00[MEX][hapmap]
rs17099228	1.00[MEX][hapmap]
rs3784169	1.00[MEX][hapmap]
rs7342555	1.00[MEX][hapmap]
rs8014960	1.00[MEX][hapmap]
rs9322895	0.90[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32797200-32831600	Weak transcription	Right Atrium	heart
2	chr14:32799400-32814600	Weak transcription	Left Ventricle	heart
3	chr14:32802600-32819000	Weak transcription	Fetal Brain Male	brain
4	chr14:32803200-32821600	Weak transcription	Fetal Brain Female	brain
5	chr14:32807200-32814600	Weak transcription	Aorta	Aorta
6	chr14:32809600-32815200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr14:32809800-32815600	Enhancers	NHEK	skin
8	chr14:32810000-32815600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr14:32810400-32815200	Enhancers	HMEC	breast
10	chr14:32811000-32815000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr14:32811000-32815200	Enhancers	Brain Angular Gyrus	brain
12	chr14:32811000-32815400	Enhancers	Brain Hippocampus Middle	brain
13	chr14:32811400-32815400	Enhancers	Brain Cingulate Gyrus	brain
14	chr14:32811800-32814600	Weak transcription	Muscle Satellite Cultured Cells	--
15	chr14:32812200-32814600	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr14:32813400-32814800	Weak transcription	Fetal Intestine Large	intestine
17	chr14:32813400-32815200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr14:32813600-32814600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr14:32813600-32814600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
20	chr14:32813800-32814600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr14:32813800-32814800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
22	chr14:32814000-32827800	Weak transcription	Brain Germinal Matrix	brain
23	chr14:32814200-32814800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
24	chr14:32814200-32815000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr14:32814200-32815000	Enhancers	Brain Anterior Caudate	brain
26	chr14:32814200-32815600	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr14:32814400-32815000	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr14:32814400-32815000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr14:32814400-32815000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr14:32814400-32815000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr14:32814400-32815000	Enhancers	Brain Inferior Temporal Lobe	brain
32	chr14:32814400-32815000	Enhancers	HepG2	liver
33	chr14:32814400-32815000	Enhancers	HSMMtube	muscle
34	chr14:32814400-32815200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr14:32814400-32815400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
36	chr14:32814400-32815400	Enhancers	Brain Substantia Nigra	brain

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