Variant report

Variant	rs17106376
Chromosome Location	chr10:92948822-92948823
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:92947556..92949360-chr10:92979346..92981559,2	K562	blood:

Variant related genes	Relation type
ENSG00000180628	Chromatin interaction

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10509623	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186502	1.00[ASN][1000 genomes]
rs12257267	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12774904	1.00[ASN][1000 genomes]
rs12780689	1.00[ASN][1000 genomes]
rs17106432	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17106435	1.00[CEU][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35848051	1.00[ASN][1000 genomes]
rs66727333	1.00[ASN][1000 genomes]
rs68172749	1.00[ASN][1000 genomes]
rs72815471	1.00[ASN][1000 genomes]
rs73310426	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7908053	0.95[YRI][hapmap];0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7921841	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:92932200-92957800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
2	chr10:92942200-92949400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr10:92944000-92951800	Enhancers	Primary T helper cells fromperipheralblood	blood
4	chr10:92944600-92951200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr10:92945000-92951200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr10:92945200-92951000	Weak transcription	Ovary	ovary
7	chr10:92945400-92949800	Weak transcription	Colon Smooth Muscle	Colon
8	chr10:92945400-92951000	Weak transcription	Pancreas	Pancrea
9	chr10:92945400-92958000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr10:92945600-92949800	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr10:92945600-92949800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr10:92945600-92949800	Weak transcription	Right Atrium	heart
13	chr10:92945600-92949800	Weak transcription	HSMM	muscle
14	chr10:92945600-92949800	Weak transcription	NHLF	lung
15	chr10:92945600-92950000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr10:92945600-92950200	Weak transcription	Rectal Smooth Muscle	rectum
17	chr10:92945600-92950400	Weak transcription	HSMMtube	muscle
18	chr10:92945600-92952000	Weak transcription	Fetal Intestine Small	intestine
19	chr10:92945600-92958200	Weak transcription	Spleen	Spleen
20	chr10:92945800-92949000	Weak transcription	NHDF-Ad	bronchial
21	chr10:92945800-92949600	Weak transcription	Osteobl	bone
22	chr10:92945800-92949800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr10:92945800-92949800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr10:92945800-92949800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr10:92945800-92949800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr10:92945800-92949800	Weak transcription	Brain Cingulate Gyrus	brain
27	chr10:92945800-92949800	Weak transcription	Brain Inferior Temporal Lobe	brain
28	chr10:92945800-92949800	Weak transcription	Left Ventricle	heart
29	chr10:92945800-92949800	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr10:92945800-92950000	Weak transcription	NH-A	brain
31	chr10:92945800-92950200	Weak transcription	Fetal Heart	heart
32	chr10:92945800-92950200	Weak transcription	Stomach Smooth Muscle	stomach
33	chr10:92945800-92952800	Weak transcription	Lung	lung
34	chr10:92945800-92953000	Weak transcription	Right Ventricle	heart
35	chr10:92946000-92949600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr10:92946200-92949800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr10:92946200-92949800	Weak transcription	Skeletal Muscle Male	skeletal muscle
38	chr10:92946200-92950000	Weak transcription	A549	lung
39	chr10:92946200-92950800	Weak transcription	Duodenum Smooth Muscle	Duodenum
40	chr10:92946200-92957800	Weak transcription	Primary T cells fromperipheralblood	blood
41	chr10:92946800-92949800	Weak transcription	Primary B cells from cord blood	blood
42	chr10:92947200-92949000	Weak transcription	Brain Hippocampus Middle	brain
43	chr10:92947200-92949400	Weak transcription	Fetal Thymus	thymus
44	chr10:92947200-92952800	Weak transcription	Primary T cells from cord blood	blood
45	chr10:92947400-92959600	Weak transcription	Thymus	Thymus
46	chr10:92948400-92949000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr10:92948400-92949000	Enhancers	Esophagus	oesophagus
48	chr10:92948400-92949000	Enhancers	HMEC	breast
49	chr10:92948400-92949200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr10:92948400-92950000	Genic enhancers	Dnd41	blood

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