The 2.0 version of rSNPBase

Variant report

Variant rs17111218
Chromosome Location chr1:94670826-94670827
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94634200-94675200 Weak transcription Rectal Smooth Muscle rectum
2 chr1:94636200-94673400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:94640000-94684800 Weak transcription Spleen Spleen
4 chr1:94642400-94684600 Weak transcription Fetal Stomach stomach
5 chr1:94644800-94684400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:94645000-94687600 Weak transcription Pancreas Pancrea
7 chr1:94647200-94675800 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr1:94647800-94676200 Weak transcription Small Intestine intestine
9 chr1:94649400-94684000 Weak transcription Right Ventricle heart
10 chr1:94649600-94680000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr1:94657000-94672000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:94660400-94681000 Weak transcription Fetal Heart heart
13 chr1:94663200-94672400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:94663200-94673000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:94663200-94674600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:94663800-94672200 Strong transcription NH-A brain
17 chr1:94664800-94671000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:94664800-94672400 Strong transcription Adipose Nuclei Adipose
19 chr1:94664800-94672800 Strong transcription HSMM muscle
20 chr1:94665400-94673400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr1:94665600-94671800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:94666200-94672200 Strong transcription Skeletal Muscle Female skeletal muscle
23 chr1:94666600-94674600 Strong transcription NHDF-Ad bronchial
24 chr1:94666800-94671200 Strong transcription Muscle Satellite Cultured Cells --
25 chr1:94666800-94671400 Strong transcription Osteobl bone
26 chr1:94668200-94673200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:94668400-94671800 Strong transcription Liver Liver
28 chr1:94668400-94674400 Strong transcription NHEK skin
29 chr1:94668400-94674800 Weak transcription Aorta Aorta
30 chr1:94668400-94687000 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:94668600-94672200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:94668600-94684400 Weak transcription Psoas Muscle Psoas
33 chr1:94668800-94673400 Strong transcription HMEC breast
34 chr1:94668800-94699000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr1:94669200-94681200 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr1:94669400-94676400 Genic enhancers HUVEC blood vessel
37 chr1:94669400-94687600 Weak transcription Gastric stomach
38 chr1:94669800-94675400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:94670000-94672000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr1:94670000-94673400 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr1:94670000-94673400 Weak transcription Fetal Muscle Trunk muscle
42 chr1:94670000-94673400 Weak transcription Left Ventricle heart
43 chr1:94670000-94673400 Weak transcription Lung lung
44 chr1:94670000-94673400 Weak transcription HSMMtube muscle
45 chr1:94670000-94684000 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr1:94670200-94672200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:94670400-94671800 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr1:94670400-94672000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:94670400-94672000 Weak transcription Fetal Muscle Leg muscle
50 chr1:94670400-94674000 Weak transcription Placenta Amnion Placenta Amnion

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Last update: Aug 31, 2015