Variant report

Variant	rs17111203
Chromosome Location	chr1:94645996-94645997
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs17111218	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17111236	0.82[EUR][1000 genomes]
rs17400584	0.85[JPT][hapmap]
rs2774922	0.84[EUR][1000 genomes]
rs3789448	1.00[CEU][hapmap]
rs4147813	1.00[CEU][hapmap]
rs72962367	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72962392	0.82[EUR][1000 genomes]
rs72964308	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94631800-94646600	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr1:94634200-94656600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr1:94634200-94658400	Strong transcription	HSMM	muscle
4	chr1:94634200-94660800	Strong transcription	NH-A	brain
5	chr1:94634200-94661800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr1:94634200-94675200	Weak transcription	Rectal Smooth Muscle	rectum
7	chr1:94634400-94646400	Strong transcription	Muscle Satellite Cultured Cells	--
8	chr1:94634400-94646600	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr1:94634400-94660400	Strong transcription	NHDF-Ad	bronchial
10	chr1:94634600-94662000	Strong transcription	HMEC	breast
11	chr1:94635000-94646800	Weak transcription	Esophagus	oesophagus
12	chr1:94635000-94658000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr1:94635800-94646200	Strong transcription	Osteobl	bone
14	chr1:94636000-94658400	Strong transcription	Liver	Liver
15	chr1:94636200-94673400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr1:94636600-94647400	Strong transcription	Adipose Nuclei	Adipose
17	chr1:94637600-94650800	Weak transcription	Pancreatic Islets	Pancreatic Islet
18	chr1:94637800-94648800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr1:94637800-94656200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
20	chr1:94638200-94646000	Weak transcription	Hela-S3	cervix
21	chr1:94638200-94646400	Weak transcription	Fetal Lung	lung
22	chr1:94638200-94654400	Weak transcription	Ovary	ovary
23	chr1:94638400-94647400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr1:94638400-94647800	Weak transcription	Brain Inferior Temporal Lobe	brain
25	chr1:94638400-94669200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr1:94638800-94647400	Strong transcription	Fetal Muscle Trunk	muscle
27	chr1:94639000-94647400	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr1:94639000-94647600	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
29	chr1:94639200-94649000	Weak transcription	Right Atrium	heart
30	chr1:94639400-94646800	Strong transcription	Left Ventricle	heart
31	chr1:94639400-94651200	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
32	chr1:94640000-94646200	Weak transcription	Brain Anterior Caudate	brain
33	chr1:94640000-94650200	Weak transcription	Psoas Muscle	Psoas
34	chr1:94640000-94684800	Weak transcription	Spleen	Spleen
35	chr1:94640200-94647000	Weak transcription	Placenta Amnion	Placenta Amnion
36	chr1:94640200-94648800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr1:94640200-94667800	Weak transcription	Gastric	stomach
38	chr1:94640400-94646200	Weak transcription	Duodenum Smooth Muscle	Duodenum
39	chr1:94640800-94647200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr1:94641800-94657600	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr1:94642200-94646800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
42	chr1:94642200-94650800	Weak transcription	Colon Smooth Muscle	Colon
43	chr1:94642400-94684600	Weak transcription	Fetal Stomach	stomach
44	chr1:94642600-94646800	Strong transcription	HUES64 Cell Line	embryonic stem cell
45	chr1:94642600-94647200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr1:94642800-94647200	Strong transcription	NHLF	lung
47	chr1:94643000-94647000	Strong transcription	Aorta	Aorta
48	chr1:94643200-94647000	Strong transcription	Lung	lung
49	chr1:94643200-94652000	Strong transcription	NHEK	skin
50	chr1:94643400-94668800	Weak transcription	Stomach Mucosa	stomach

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