The 2.0 version of rSNPBase

Variant report

Variant rs17111236
Chromosome Location chr1:94696213-94696214
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94668800-94699000 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr1:94673800-94698600 Weak transcription Fetal Muscle Trunk muscle
3 chr1:94673800-94701000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:94674000-94697000 Weak transcription HSMMtube muscle
5 chr1:94684800-94698600 Weak transcription Left Ventricle heart
6 chr1:94685000-94701000 Weak transcription Right Ventricle heart
7 chr1:94685200-94696800 Weak transcription HepG2 liver
8 chr1:94685200-94700600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr1:94685200-94700800 Weak transcription NHLF lung
10 chr1:94685200-94701000 Weak transcription Psoas Muscle Psoas
11 chr1:94685400-94697400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:94685800-94699400 Weak transcription Fetal Muscle Leg muscle
13 chr1:94690400-94696400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr1:94691600-94696400 Weak transcription HSMM muscle
15 chr1:94692200-94696600 Weak transcription NH-A brain
16 chr1:94692600-94700200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:94693400-94696400 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr1:94693600-94696800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr1:94693600-94697000 Enhancers HUVEC blood vessel
20 chr1:94694200-94696800 Enhancers Muscle Satellite Cultured Cells --
21 chr1:94694400-94697200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:94694400-94698400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr1:94694800-94696400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:94694800-94696400 Weak transcription A549 lung
25 chr1:94694800-94696800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:94694800-94699400 Weak transcription Stomach Mucosa stomach
27 chr1:94695000-94696600 Weak transcription NHDF-Ad bronchial
28 chr1:94695200-94696400 Weak transcription Osteobl bone
29 chr1:94695200-94696600 Weak transcription HMEC breast
30 chr1:94695800-94697800 Enhancers Adipose Nuclei Adipose
31 chr1:94696000-94696400 Weak transcription NHEK skin
32 chr1:94696000-94697200 Enhancers Breast Myoepithelial Primary Cells Breast
33 chr1:94696200-94696400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr1:94696200-94696800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:94696200-94697000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:94696200-94697200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:94696200-94697600 Enhancers Liver Liver
38 chr1:94696200-94698000 Enhancers Skeletal Muscle Male skeletal muscle
39 chr1:94696200-94701200 Enhancers Fetal Heart heart

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Last update: Aug 31, 2015