Variant report

Variant	rs72962392
Chromosome Location	chr1:94696744-94696745
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:94502816..94505360-chr1:94694750..94697690,2	MCF-7	breast:
2	chr1:94664561..94667035-chr1:94696227..94698002,2	K562	blood:

rs_ID	r²[population]
rs17111203	0.82[EUR][1000 genomes]
rs17111218	0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17111236	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17396055	0.95[ASN][1000 genomes]
rs17400584	0.95[ASN][1000 genomes]
rs2130896	0.95[ASN][1000 genomes]
rs55937938	0.95[ASN][1000 genomes]
rs72962367	0.82[EUR][1000 genomes]
rs72964308	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94668800-94699000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
2	chr1:94673800-94698600	Weak transcription	Fetal Muscle Trunk	muscle
3	chr1:94673800-94701000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr1:94674000-94697000	Weak transcription	HSMMtube	muscle
5	chr1:94684800-94698600	Weak transcription	Left Ventricle	heart
6	chr1:94685000-94701000	Weak transcription	Right Ventricle	heart
7	chr1:94685200-94696800	Weak transcription	HepG2	liver
8	chr1:94685200-94700600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr1:94685200-94700800	Weak transcription	NHLF	lung
10	chr1:94685200-94701000	Weak transcription	Psoas Muscle	Psoas
11	chr1:94685400-94697400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr1:94685800-94699400	Weak transcription	Fetal Muscle Leg	muscle
13	chr1:94692600-94700200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr1:94693600-94696800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr1:94693600-94697000	Enhancers	HUVEC	blood vessel
16	chr1:94694200-94696800	Enhancers	Muscle Satellite Cultured Cells	--
17	chr1:94694400-94697200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr1:94694400-94698400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
19	chr1:94694800-94696800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr1:94694800-94699400	Weak transcription	Stomach Mucosa	stomach
21	chr1:94695800-94697800	Enhancers	Adipose Nuclei	Adipose
22	chr1:94696000-94697200	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr1:94696200-94696800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr1:94696200-94697000	Genic enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr1:94696200-94697200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
26	chr1:94696200-94697600	Enhancers	Liver	Liver
27	chr1:94696200-94698000	Enhancers	Skeletal Muscle Male	skeletal muscle
28	chr1:94696200-94701200	Enhancers	Fetal Heart	heart
29	chr1:94696400-94696800	Enhancers	Pancreatic Islets	Pancreatic Islet
30	chr1:94696400-94697000	Genic enhancers	NHEK	skin
31	chr1:94696400-94697000	Enhancers	Osteobl	bone
32	chr1:94696400-94697400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr1:94696400-94697400	Enhancers	HSMM	muscle
34	chr1:94696400-94698000	Enhancers	Skeletal Muscle Female	skeletal muscle
35	chr1:94696400-94699400	Genic enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr1:94696400-94700400	Enhancers	A549	lung
37	chr1:94696600-94697000	Enhancers	HMEC	breast
38	chr1:94696600-94698400	Enhancers	NHDF-Ad	bronchial
39	chr1:94696600-94698800	Enhancers	NH-A	brain

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