The 2.0 version of rSNPBase

Variant report

Variant rs17121366
Chromosome Location chr12:45741414-45741415
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:45693000-45744000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr12:45695200-45741800 Weak transcription Primary T helper naive cells fromperipheralblood blood
3 chr12:45698000-45744400 Weak transcription Fetal Brain Male brain
4 chr12:45699000-45741800 Weak transcription Primary B cells from peripheral blood blood
5 chr12:45699800-45747800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr12:45700000-45743600 Weak transcription Gastric stomach
7 chr12:45701400-45743400 Weak transcription H9 Cell Line embryonic stem cell
8 chr12:45708600-45742000 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr12:45709200-45743600 Weak transcription Spleen Spleen
10 chr12:45709800-45741800 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr12:45709800-45743800 Weak transcription Fetal Stomach stomach
12 chr12:45710200-45741800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr12:45720600-45741800 Weak transcription Pancreas Pancrea
14 chr12:45720600-45743600 Weak transcription Lung lung
15 chr12:45720800-45741800 Weak transcription Small Intestine intestine
16 chr12:45722200-45744400 Weak transcription Esophagus oesophagus
17 chr12:45723800-45757000 Weak transcription Brain Hippocampus Middle brain
18 chr12:45725800-45782000 Weak transcription Brain Angular Gyrus brain
19 chr12:45726000-45741800 Weak transcription Fetal Kidney kidney
20 chr12:45726000-45743400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr12:45726600-45741600 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr12:45726600-45741600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr12:45726600-45741800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr12:45726600-45747200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr12:45726800-45741800 Weak transcription Fetal Lung lung
26 chr12:45726800-45742000 Weak transcription Duodenum Mucosa Duodenum
27 chr12:45726800-45743400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr12:45727400-45741800 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr12:45728200-45741800 Weak transcription Liver Liver
30 chr12:45731000-45742000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr12:45732400-45741800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr12:45732800-45741800 Weak transcription H1 Cell Line embryonic stem cell
33 chr12:45732800-45741800 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr12:45732800-45741800 Weak transcription Psoas Muscle Psoas
35 chr12:45733000-45741800 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr12:45733000-45742400 Weak transcription K562 blood
37 chr12:45733000-45743400 Weak transcription Ovary ovary
38 chr12:45734000-45741600 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr12:45734600-45747600 Weak transcription Stomach Mucosa stomach
40 chr12:45735400-45742400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr12:45735400-45755200 Strong transcription Monocytes-CD14+_RO01746 blood
42 chr12:45737400-45741600 Weak transcription Hela-S3 cervix
43 chr12:45737400-45741800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr12:45737400-45741800 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr12:45737400-45742000 Weak transcription HUVEC blood vessel
46 chr12:45737400-45742200 Weak transcription NHLF lung
47 chr12:45737400-45742600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr12:45737400-45748800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr12:45737600-45741800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr12:45737600-45741800 Weak transcription Adipose Nuclei Adipose

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Last update: Aug 31, 2015