Variant report
| Variant | rs58940403 |
|---|---|
| Chromosome Location | chr12:45827345-45827346 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:45780400-45829800 | Weak transcription | Brain Anterior Caudate | brain |
| 2 | chr12:45792000-45828600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 3 | chr12:45793000-45827600 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 4 | chr12:45796400-45829600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 5 | chr12:45796600-45828400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 6 | chr12:45796600-45828600 | Weak transcription | Brain Substantia Nigra | brain |
| 7 | chr12:45796600-45828800 | Weak transcription | Brain Angular Gyrus | brain |
| 8 | chr12:45804400-45828000 | Weak transcription | Brain Hippocampus Middle | brain |
| 9 | chr12:45804400-45830200 | Weak transcription | Brain Germinal Matrix | brain |
| 10 | chr12:45806800-45829800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr12:45811600-45829400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 12 | chr12:45812600-45832000 | Weak transcription | Small Intestine | intestine |
| 13 | chr12:45813000-45829600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 14 | chr12:45816400-45828200 | Strong transcription | Fetal Adrenal Gland | Adrenal Gland |
| 15 | chr12:45817400-45828800 | Weak transcription | NHEK | skin |
| 16 | chr12:45817800-45829200 | Weak transcription | Psoas Muscle | Psoas |
| 17 | chr12:45818000-45828600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 18 | chr12:45819400-45827600 | Strong transcription | Liver | Liver |
| 19 | chr12:45819600-45830000 | Weak transcription | GM12878-XiMat | blood |
| 20 | chr12:45820000-45828000 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 21 | chr12:45821200-45829200 | Weak transcription | Right Atrium | heart |
| 22 | chr12:45821200-45829400 | Weak transcription | NHLF | lung |
| 23 | chr12:45821200-45829800 | Weak transcription | Fetal Heart | heart |
| 24 | chr12:45821200-45833000 | Weak transcription | NH-A | brain |
| 25 | chr12:45822000-45828000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 26 | chr12:45822200-45828000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 27 | chr12:45823000-45829000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 28 | chr12:45823200-45829800 | Weak transcription | Fetal Lung | lung |
| 29 | chr12:45824200-45829800 | Weak transcription | Osteobl | bone |
| 30 | chr12:45824200-45832800 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 31 | chr12:45824600-45829400 | Weak transcription | HMEC | breast |
| 32 | chr12:45824800-45828400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 33 | chr12:45824800-45833000 | Weak transcription | NHDF-Ad | bronchial |
| 34 | chr12:45825400-45830000 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 35 | chr12:45825600-45828000 | Weak transcription | K562 | blood |
| 36 | chr12:45825600-45828400 | Weak transcription | Fetal Intestine Large | intestine |
| 37 | chr12:45825600-45828600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 38 | chr12:45825600-45829200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 39 | chr12:45825600-45829200 | Weak transcription | Spleen | Spleen |
| 40 | chr12:45825600-45829400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 41 | chr12:45825600-45829800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 42 | chr12:45825600-45829800 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 43 | chr12:45825600-45830000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 44 | chr12:45825600-45830000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 45 | chr12:45825600-45831800 | Weak transcription | Lung | lung |
| 46 | chr12:45825600-45831800 | Weak transcription | Ovary | ovary |
| 47 | chr12:45825600-45835800 | Weak transcription | Colon Smooth Muscle | Colon |
| 48 | chr12:45825800-45829000 | Weak transcription | HUVEC | blood vessel |
| 49 | chr12:45826000-45827600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 50 | chr12:45826000-45828600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
