The 2.0 version of rSNPBase

Variant report

Variant rs17128017
Chromosome Location chr14:55308820-55308821
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55301000-55310000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr14:55303400-55337000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr14:55304800-55309200 Weak transcription Duodenum Mucosa Duodenum
4 chr14:55305000-55320400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr14:55305200-55312200 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr14:55305200-55337200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr14:55305400-55314000 Weak transcription Primary hematopoietic stem cells blood
8 chr14:55305400-55325800 Weak transcription Spleen Spleen
9 chr14:55305600-55313200 Strong transcription Primary T cells from cord blood blood
10 chr14:55305800-55313000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr14:55305800-55313200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
12 chr14:55305800-55313600 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr14:55305800-55321000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr14:55305800-55326400 Weak transcription Fetal Thymus thymus
15 chr14:55306000-55309000 Weak transcription Right Ventricle heart
16 chr14:55306000-55314200 Strong transcription Primary monocytes fromperipheralblood blood
17 chr14:55306200-55309400 Enhancers Liver Liver
18 chr14:55306200-55320800 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr14:55306200-55337000 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr14:55306400-55309800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr14:55306400-55311200 Strong transcription Primary T regulatory cells fromperipheralblood blood
22 chr14:55306400-55311400 Strong transcription Primary T helper cells fromperipheralblood blood
23 chr14:55306400-55312800 Weak transcription Gastric stomach
24 chr14:55306400-55336800 Weak transcription Dnd41 blood
25 chr14:55306600-55321000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr14:55306600-55336600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr14:55306800-55309200 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr14:55306800-55327400 Weak transcription Pancreas Pancrea
29 chr14:55306800-55337000 Weak transcription Brain Anterior Caudate brain
30 chr14:55307000-55310200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr14:55307000-55312400 Weak transcription Stomach Mucosa stomach
32 chr14:55307000-55313400 Strong transcription Primary T helper cells PMA-I stimulated --
33 chr14:55307200-55309800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr14:55307200-55309800 Strong transcription GM12878-XiMat blood
35 chr14:55307200-55313000 Strong transcription Primary T cells fromperipheralblood blood
36 chr14:55307400-55309600 Weak transcription Aorta Aorta
37 chr14:55307400-55309800 Weak transcription Fetal Muscle Leg muscle
38 chr14:55307400-55309800 Weak transcription Fetal Stomach stomach
39 chr14:55307400-55310200 Strong transcription Primary B cells from peripheral blood blood
40 chr14:55307600-55309800 Strong transcription Primary T helper naive cells from peripheral blood blood
41 chr14:55307800-55309400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr14:55307800-55310200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr14:55308000-55309800 Strong transcription Thymus Thymus
44 chr14:55308000-55336600 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr14:55308200-55310000 Weak transcription Fetal Intestine Large intestine
46 chr14:55308200-55310800 Weak transcription HepG2 liver
47 chr14:55308200-55313000 Weak transcription Esophagus oesophagus
48 chr14:55308200-55332400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr14:55308400-55309600 Weak transcription Left Ventricle heart
50 chr14:55308400-55310000 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015