Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:55293129..55294978-chr14:55368791..55371279,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000131979	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs13329058	1.00[ASN][1000 genomes]
rs17127987	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17127998	1.00[ASN][1000 genomes]
rs17128017	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17253577	1.00[ASN][1000 genomes]
rs17253584	0.86[ASN][1000 genomes]
rs2004633	0.86[ASN][1000 genomes]
rs35508671	1.00[AMR][1000 genomes]
rs45454691	0.86[ASN][1000 genomes]
rs55786710	1.00[ASN][1000 genomes]
rs58292420	0.83[ASN][1000 genomes]
rs60407360	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60475452	1.00[AMR][1000 genomes]
rs60481635	1.00[ASN][1000 genomes]
rs7147200	1.00[ASN][1000 genomes]
rs7153186	1.00[ASN][1000 genomes]
rs7153566	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73276810	0.83[ASN][1000 genomes]
rs73276819	0.83[ASN][1000 genomes]
rs73278762	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73278771	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73278772	0.86[ASN][1000 genomes]
rs73278793	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530042	chr14:55208170-55386966	Enhancers Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55293800-55306400	Weak transcription	Aorta	Aorta

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