The 2.0 version of rSNPBase

Variant report

Variant rs7147200
Chromosome Location chr14:55328056-55328057
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr14:55303400-55337000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr14:55305200-55337200 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr14:55306200-55337000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr14:55306400-55336800 Weak transcription Dnd41 blood
5 chr14:55306600-55336600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr14:55306800-55337000 Weak transcription Brain Anterior Caudate brain
7 chr14:55308000-55336600 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr14:55308200-55332400 Weak transcription Fetal Adrenal Gland Adrenal Gland
9 chr14:55308400-55330600 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr14:55311800-55331200 Weak transcription Hela-S3 cervix
11 chr14:55311800-55337000 Weak transcription Fetal Intestine Large intestine
12 chr14:55321000-55329400 Weak transcription Stomach Mucosa stomach
13 chr14:55321000-55337000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr14:55321200-55337000 Weak transcription H1 Cell Line embryonic stem cell
15 chr14:55321400-55329400 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr14:55322800-55331600 Strong transcription Primary T helper cells fromperipheralblood blood
17 chr14:55324200-55331400 Strong transcription Primary T cells fromperipheralblood blood
18 chr14:55324400-55334000 Weak transcription Fetal Muscle Trunk muscle
19 chr14:55324800-55331200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr14:55324800-55332400 Weak transcription Fetal Lung lung
21 chr14:55324800-55337000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr14:55325000-55331200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr14:55325000-55331200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr14:55325000-55332600 Weak transcription Small Intestine intestine
25 chr14:55325000-55337200 Weak transcription Adipose Nuclei Adipose
26 chr14:55325200-55333200 Weak transcription Fetal Stomach stomach
27 chr14:55325400-55332200 Strong transcription Primary T regulatory cells fromperipheralblood blood
28 chr14:55326000-55328400 Weak transcription Gastric stomach
29 chr14:55326200-55331600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr14:55326200-55333400 Weak transcription GM12878-XiMat blood
31 chr14:55326200-55336400 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr14:55326400-55329000 Weak transcription Fetal Intestine Small intestine
33 chr14:55326400-55329600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr14:55326400-55330400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr14:55326400-55331200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr14:55326400-55332400 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr14:55326400-55333200 Weak transcription Lung lung
38 chr14:55326400-55333200 Weak transcription Spleen Spleen
39 chr14:55326600-55332600 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr14:55326600-55336600 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr14:55326800-55331400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr14:55327000-55332400 Weak transcription Thymus Thymus
43 chr14:55327000-55336000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
44 chr14:55327000-55336400 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr14:55327000-55338200 Weak transcription Primary B cells from peripheral blood blood
46 chr14:55327200-55328600 Weak transcription Primary T cells from cord blood blood
47 chr14:55327200-55329200 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr14:55327200-55330200 Weak transcription Liver Liver
49 chr14:55327200-55331200 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr14:55327200-55331200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015