Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12700004	0.88[YRI][hapmap]
rs12700005	0.89[YRI][hapmap]
rs13234557	0.89[YRI][hapmap]
rs13238305	0.89[YRI][hapmap]
rs16872139	1.00[ASW][hapmap];0.92[LWK][hapmap];0.95[MKK][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17140220	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56946519	1.00[EUR][1000 genomes]
rs57527340	1.00[AMR][1000 genomes]
rs58507095	1.00[EUR][1000 genomes]
rs59951772	1.00[EUR][1000 genomes]
rs60383654	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60765366	1.00[EUR][1000 genomes]
rs61141393	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73312685	1.00[EUR][1000 genomes]
rs73312695	1.00[EUR][1000 genomes]
rs73320004	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73320006	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73320021	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73320029	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73320031	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73320042	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73320054	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7806036	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv523497	chr7:18896011-18959381	Weak transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2756248	chr7:18911960-18977760	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18903000-18940000	Weak transcription	Aorta	Aorta
2	chr7:18906200-18929200	Weak transcription	Left Ventricle	heart
3	chr7:18913800-18914400	Enhancers	NHDF-Ad	bronchial
4	chr7:18913800-18915200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr7:18913800-18915200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr7:18913800-18915200	Enhancers	Adipose Nuclei	Adipose

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