Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10229061	1.00[ASN][1000 genomes]
rs10230384	1.00[ASN][1000 genomes]
rs10238286	1.00[ASN][1000 genomes]
rs10428938	1.00[ASN][1000 genomes]
rs10429110	1.00[ASN][1000 genomes]
rs11974339	1.00[ASN][1000 genomes]
rs11982910	1.00[ASN][1000 genomes]
rs11983655	1.00[ASN][1000 genomes]
rs12530696	1.00[ASN][1000 genomes]
rs12535568	1.00[ASN][1000 genomes]
rs2402472	1.00[ASN][1000 genomes]
rs2896282	1.00[ASN][1000 genomes]
rs5008597	1.00[ASN][1000 genomes]
rs58995702	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59542865	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59579039	1.00[ASN][1000 genomes]
rs59876674	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60400629	1.00[ASN][1000 genomes]
rs60633631	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60719196	1.00[ASN][1000 genomes]
rs61253321	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs61262878	1.00[ASN][1000 genomes]
rs6960072	1.00[ASN][1000 genomes]
rs7776651	1.00[ASN][1000 genomes]
rs7782105	1.00[ASN][1000 genomes]
rs7811650	1.00[ASN][1000 genomes]
rs9784954	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889098	chr7:118590050-118896639	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv1825159	chr7:118640865-118842361	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv889099	chr7:118709754-118868426	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv889100	chr7:118744450-119247571	Enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:118765200-118767000	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr7:118765600-118766800	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr7:118765600-118767000	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr7:118765800-118766800	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr7:118765800-118766800	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr7:118765800-118767000	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr7:118765800-118767000	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr7:118766000-118767000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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