Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10488292	1.00[CEU][hapmap]
rs10488298	1.00[CEU][hapmap]
rs12531689	1.00[CEU][hapmap];1.00[GIH][hapmap];0.80[MEX][hapmap]
rs12666810	1.00[CEU][hapmap]
rs12672579	1.00[CEU][hapmap]
rs12673578	1.00[CEU][hapmap]
rs17142724	1.00[CEU][hapmap]
rs17142737	1.00[CEU][hapmap]
rs17142741	1.00[CEU][hapmap]
rs41391947	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs6953921	0.86[AMR][1000 genomes]
rs802334	1.00[CEU][hapmap]
rs802335	1.00[CEU][hapmap]
rs802338	1.00[CEU][hapmap]
rs802339	1.00[CEU][hapmap]
rs802362	1.00[CEU][hapmap]
rs802365	1.00[CEU][hapmap]
rs802374	1.00[CEU][hapmap]
rs802377	1.00[CEU][hapmap]
rs802378	1.00[CEU][hapmap]
rs9641639	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608326	chr7:119828331-119995890	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:119939400-119995600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr7:119990000-119990600	Active TSS	Primary Natural Killer cells fromperipheralblood	blood

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