Variant report

Variant rs17153506
Chromosome Location chr7:79791218-79791219
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:79776200-79796200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr7:79780400-79791400 Weak transcription Psoas Muscle Psoas
3 chr7:79781200-79803200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr7:79781600-79794200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr7:79781600-79795200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr7:79781600-79797000 Weak transcription Primary hematopoietic stem cells short term culture blood
7 chr7:79783200-79794000 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr7:79783800-79806600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr7:79784000-79792000 Weak transcription Fetal Kidney kidney
10 chr7:79784800-79791400 Enhancers Brain Substantia Nigra brain
11 chr7:79785600-79794400 Weak transcription Rectal Smooth Muscle rectum
12 chr7:79786200-79791800 Weak transcription Fetal Brain Male brain
13 chr7:79786200-79794200 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr7:79786200-79796600 Weak transcription NHEK skin
15 chr7:79786200-79799600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr7:79788000-79795200 Weak transcription H1 Cell Line embryonic stem cell
17 chr7:79788200-79792200 Enhancers Adipose Nuclei Adipose
18 chr7:79788400-79791800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr7:79788400-79792600 Weak transcription Brain Angular Gyrus brain
20 chr7:79788600-79799000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr7:79788600-79799800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr7:79788800-79791400 Enhancers Pancreatic Islets Pancreatic Islet
23 chr7:79788800-79794600 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr7:79788800-79796400 Weak transcription Brain Anterior Caudate brain
25 chr7:79789200-79791800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr7:79789400-79793000 Weak transcription A549 lung
27 chr7:79789400-79814200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
28 chr7:79789600-79792800 Enhancers Brain Hippocampus Middle brain
29 chr7:79790000-79792000 Weak transcription Brain Inferior Temporal Lobe brain
30 chr7:79790000-79793800 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr7:79790200-79793200 Enhancers Brain Cingulate Gyrus brain
32 chr7:79790600-79793200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr7:79790600-79793400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr7:79791000-79792200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
35 chr7:79791200-79791400 Enhancers NHDF-Ad bronchial
36 chr7:79791200-79791600 Enhancers Ovary ovary
37 chr7:79791200-79791600 Enhancers Spleen Spleen
38 chr7:79791200-79792200 Enhancers Gastric stomach
39 chr7:79791200-79792800 Enhancers Primary hematopoietic stem cells blood
40 chr7:79791200-79793000 Enhancers Fetal Lung lung
41 chr7:79791200-79794200 Weak transcription Colon Smooth Muscle Colon
42 chr7:79791200-79799400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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