Variant report

Variant	rs17156232
Chromosome Location	chr7:103445451-103445452
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17133096	0.82[CEU][hapmap];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs262360	0.87[ASN][1000 genomes]
rs262368	0.87[ASN][1000 genomes]
rs262369	0.87[ASN][1000 genomes]
rs262374	0.93[ASN][1000 genomes]
rs262376	0.93[ASN][1000 genomes]
rs262377	0.87[ASN][1000 genomes]
rs262378	0.87[ASN][1000 genomes]
rs262379	0.87[ASN][1000 genomes]
rs264375	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427799	chr7:103250733-103454202	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103437000-103446000	Weak transcription	HepG2	liver
2	chr7:103440400-103449400	Weak transcription	K562	blood
3	chr7:103444200-103446800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr7:103445000-103445600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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