Variant report

Variant rs171774
Chromosome Location chr5:114935239-114935240
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:114911200-114935600 Weak transcription Gastric stomach
2 chr5:114914400-114936200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
3 chr5:114914800-114937400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr5:114919800-114935600 Weak transcription NH-A brain
5 chr5:114921600-114935400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:114925000-114937400 Weak transcription Pancreas Pancrea
7 chr5:114930200-114937400 Weak transcription Hela-S3 cervix
8 chr5:114930600-114936400 Weak transcription HUVEC blood vessel
9 chr5:114930800-114935400 Weak transcription HSMM muscle
10 chr5:114930800-114935600 Weak transcription Fetal Brain Female brain
11 chr5:114931000-114936800 Weak transcription Fetal Brain Male brain
12 chr5:114931600-114937000 Weak transcription Fetal Intestine Small intestine
13 chr5:114933000-114937400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr5:114933800-114937200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr5:114934200-114936600 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr5:114934600-114936600 Enhancers Primary monocytes fromperipheralblood blood
17 chr5:114934600-114937200 Enhancers Primary B cells from peripheral blood blood
18 chr5:114934800-114936800 Enhancers Adipose Nuclei Adipose
19 chr5:114934800-114936800 Flanking Active TSS GM12878-XiMat blood
20 chr5:114935000-114935600 Enhancers Brain Inferior Temporal Lobe brain
21 chr5:114935000-114936400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:114935000-114936600 Flanking Active TSS NHLF lung
23 chr5:114935000-114937000 Enhancers Primary B cells from cord blood blood
24 chr5:114935000-114937000 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr5:114935000-114937000 Enhancers Colon Smooth Muscle Colon
26 chr5:114935000-114937000 Enhancers Fetal Heart heart
27 chr5:114935000-114937200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr5:114935000-114937400 Enhancers Brain Anterior Caudate brain
29 chr5:114935200-114935400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
30 chr5:114935200-114935400 Enhancers Primary T helper cells fromperipheralblood blood
31 chr5:114935200-114935400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
32 chr5:114935200-114935400 Enhancers Duodenum Mucosa Duodenum
33 chr5:114935200-114935400 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr5:114935200-114935600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
35 chr5:114935200-114935600 Enhancers Breast Myoepithelial Primary Cells Breast
36 chr5:114935200-114935600 Enhancers Aorta Aorta
37 chr5:114935200-114935600 Flanking Active TSS Pancreatic Islets Pancreatic Islet
38 chr5:114935200-114935600 Flanking Active TSS Fetal Lung lung
39 chr5:114935200-114935600 Active TSS Rectal Mucosa Donor 29 rectum
40 chr5:114935200-114935600 Flanking Active TSS NHDF-Ad bronchial
41 chr5:114935200-114935800 Enhancers HUES6 Cell Line embryonic stem cell
42 chr5:114935200-114935800 Enhancers Ovary ovary
43 chr5:114935200-114935800 Enhancers Osteobl bone
44 chr5:114935200-114936000 Enhancers iPS-15b Cell Line embryonic stem cell
45 chr5:114935200-114936000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
46 chr5:114935200-114936000 Enhancers Right Atrium heart
47 chr5:114935200-114936000 Enhancers Right Ventricle heart
48 chr5:114935200-114936200 Enhancers ES-I3 Cell Line embryonic stem cell
49 chr5:114935200-114936200 Enhancers HUES48 Cell Line embryonic stem cell
50 chr5:114935200-114936200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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