Variant report

Variant rs17186496
Chromosome Location chr6:29936194-29936195
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29916800-29940200 Weak transcription Gastric stomach
2 chr6:29927800-29938800 Weak transcription Spleen Spleen
3 chr6:29932200-29936200 Enhancers Fetal Intestine Small intestine
4 chr6:29933200-29936200 Enhancers H1 Cell Line embryonic stem cell
5 chr6:29933200-29936400 Enhancers Fetal Heart heart
6 chr6:29933200-29937400 Weak transcription Placenta Amnion Placenta Amnion
7 chr6:29933400-29937200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr6:29933600-29942400 Weak transcription Lung lung
9 chr6:29933800-29936400 Enhancers Fetal Muscle Leg muscle
10 chr6:29933800-29936600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr6:29934000-29936200 Enhancers Primary hematopoietic stem cells blood
12 chr6:29934000-29936200 Enhancers NHDF-Ad bronchial
13 chr6:29934000-29936400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
14 chr6:29934000-29936400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr6:29934200-29936200 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr6:29934200-29936200 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr6:29934200-29936200 Enhancers Primary T killer naive cells fromperipheralblood blood
18 chr6:29934200-29936200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr6:29934200-29936200 Enhancers Stomach Smooth Muscle stomach
20 chr6:29934200-29936200 Enhancers NHLF lung
21 chr6:29934200-29936200 Enhancers Osteobl bone
22 chr6:29934200-29936400 Enhancers Adipose Nuclei Adipose
23 chr6:29934200-29936400 Enhancers Rectal Mucosa Donor 31 rectum
24 chr6:29934200-29936400 Enhancers Stomach Mucosa stomach
25 chr6:29934200-29936600 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr6:29934200-29936600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr6:29934200-29936600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:29934200-29936600 Enhancers HSMM muscle
29 chr6:29934200-29936600 Enhancers NHEK skin
30 chr6:29934200-29937200 Enhancers HMEC breast
31 chr6:29934200-29939800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr6:29934400-29936200 Enhancers Primary T regulatory cells fromperipheralblood blood
33 chr6:29934400-29936400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr6:29934400-29936400 Enhancers HUES48 Cell Line embryonic stem cell
35 chr6:29934400-29936600 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr6:29934400-29936600 Enhancers A549 lung
37 chr6:29934400-29938200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr6:29934400-29944200 Weak transcription Aorta Aorta
39 chr6:29934600-29936200 Enhancers HUES64 Cell Line embryonic stem cell
40 chr6:29934600-29936200 Enhancers Muscle Satellite Cultured Cells --
41 chr6:29934600-29936200 Enhancers Liver Liver
42 chr6:29934600-29936600 Enhancers Skeletal Muscle Male skeletal muscle
43 chr6:29934600-29936800 Weak transcription Colonic Mucosa Colon
44 chr6:29934800-29936400 Enhancers HUES6 Cell Line embryonic stem cell
45 chr6:29934800-29936600 Enhancers Duodenum Smooth Muscle Duodenum
46 chr6:29934800-29936600 Enhancers Skeletal Muscle Female skeletal muscle
47 chr6:29934800-29939600 Weak transcription Primary neutrophils fromperipheralblood blood
48 chr6:29934800-29942600 Weak transcription Brain Substantia Nigra brain
49 chr6:29935000-29936400 Enhancers Thymus Thymus
50 chr6:29935000-29936600 Enhancers Hela-S3 cervix

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