Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10166875	0.83[EUR][1000 genomes]
rs10169970	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs10183152	0.91[EUR][1000 genomes]
rs13398913	0.88[EUR][1000 genomes]
rs1851169	0.96[CEU][hapmap];0.86[MKK][hapmap];0.89[TSI][hapmap];0.90[EUR][1000 genomes]
rs1851170	0.88[CEU][hapmap];0.84[EUR][1000 genomes]
rs1983399	0.89[EUR][1000 genomes]
rs2371308	0.96[CEU][hapmap];0.89[EUR][1000 genomes]
rs4016512	0.90[EUR][1000 genomes]
rs4673628	0.96[CEU][hapmap];0.91[TSI][hapmap];0.89[EUR][1000 genomes]
rs62185367	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6714837	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs6741480	0.89[EUR][1000 genomes]
rs6743138	0.96[CEU][hapmap];0.90[EUR][1000 genomes]
rs6755268	0.89[EUR][1000 genomes]
rs7562364	0.89[EUR][1000 genomes]
rs7562573	0.89[EUR][1000 genomes]
rs7565321	0.83[EUR][1000 genomes]
rs7565327	0.95[CEU][hapmap];0.89[EUR][1000 genomes]
rs7579224	0.83[EUR][1000 genomes]
rs7591647	0.96[CEU][hapmap];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754366	chr2:212470494-212541494	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
2	nsv460070	chr2:212492764-212541377	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Active TSS Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases
3	nsv584322	chr2:212492764-212541377	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
2	chr2:212514600-212527600	Weak transcription	Brain Hippocampus Middle	brain
3	chr2:212514800-212528800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr2:212520200-212527800	Weak transcription	Brain Anterior Caudate	brain
5	chr2:212521200-212540400	Weak transcription	Fetal Heart	heart
6	chr2:212521400-212540800	Weak transcription	Fetal Kidney	kidney
7	chr2:212522800-212527200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr2:212522800-212537800	Weak transcription	Pancreas	Pancrea

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