Variant report

Variant	rs6755268
Chromosome Location	chr2:212546206-212546207
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10166875	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10169970	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10173674	0.85[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs10173683	0.87[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs10176100	0.87[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs10179515	0.93[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs10183152	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13398913	0.98[EUR][1000 genomes]
rs17335518	0.89[EUR][1000 genomes]
rs1851169	0.99[EUR][1000 genomes]
rs1851170	0.93[EUR][1000 genomes]
rs1983399	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2371308	1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2887994	0.83[ASN][1000 genomes]
rs4016512	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4673628	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62185367	0.89[EUR][1000 genomes]
rs6714837	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6741480	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6743138	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7562364	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7562573	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7565321	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7565327	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7579224	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7591647	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875783	chr2:212530466-212564895	Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212467400-212546800	Weak transcription	Aorta	Aorta
2	chr2:212530200-212546800	Weak transcription	Left Ventricle	heart
3	chr2:212538000-212546800	Weak transcription	Pancreas	Pancrea
4	chr2:212541000-212546800	Weak transcription	Fetal Kidney	kidney
5	chr2:212546200-212546600	Weak transcription	Brain Cingulate Gyrus	brain

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