Variant report

Variant	rs17370923
Chromosome Location	chr5:57441506-57441507
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs17371148	1.00[ASW][hapmap];1.00[CEU][hapmap];0.96[LWK][hapmap];1.00[TSI][hapmap];0.85[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs17438760	0.84[ASW][hapmap];1.00[CEU][hapmap];0.93[TSI][hapmap];0.82[EUR][1000 genomes]
rs58675651	0.82[EUR][1000 genomes]
rs66464750	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs66473131	0.83[EUR][1000 genomes]
rs66812437	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs67843459	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6882495	0.89[CEU][hapmap]
rs72753372	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033051	chr5:57380218-57471801	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57439600-57451000	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
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