The 2.0 version of rSNPBase

Variant report

Variant rs1738547
Chromosome Location chr11:33752825-33752826
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:33723400-33753400 Weak transcription Primary B cells from cord blood blood
2 chr11:33744000-33755400 Weak transcription Brain Germinal Matrix brain
3 chr11:33744000-33755800 Weak transcription Cortex derived primary cultured neurospheres brain
4 chr11:33744000-33756400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr11:33744200-33755600 Weak transcription Fetal Brain Female brain
6 chr11:33744400-33756200 Weak transcription Primary T cells from cord blood blood
7 chr11:33744600-33755400 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr11:33744800-33753600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr11:33744800-33754600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr11:33745000-33753400 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr11:33745400-33756200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr11:33746200-33754000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr11:33746200-33756200 Weak transcription H1 Cell Line embryonic stem cell
14 chr11:33746400-33753000 Weak transcription Primary neutrophils fromperipheralblood blood
15 chr11:33746400-33753000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr11:33746400-33753000 Weak transcription Aorta Aorta
17 chr11:33746400-33753000 Weak transcription Lung lung
18 chr11:33746400-33753000 Weak transcription Pancreas Pancrea
19 chr11:33746400-33753000 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr11:33746400-33753000 Weak transcription Small Intestine intestine
21 chr11:33746400-33753400 Weak transcription Colonic Mucosa Colon
22 chr11:33746400-33755200 Weak transcription Fetal Muscle Trunk muscle
23 chr11:33746400-33755600 Weak transcription iPS-20b Cell Line embryonic stem cell
24 chr11:33746600-33753000 Weak transcription Fetal Thymus thymus
25 chr11:33746600-33753600 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr11:33746600-33753800 Weak transcription Gastric stomach
27 chr11:33746600-33754200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr11:33746600-33755400 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr11:33746600-33755600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr11:33746600-33755600 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr11:33746600-33755800 Weak transcription Placenta Amnion Placenta Amnion
32 chr11:33746600-33756400 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr11:33746600-33756400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr11:33746600-33756400 Weak transcription Fetal Kidney kidney
35 chr11:33746600-33756600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr11:33746800-33754400 Weak transcription Stomach Mucosa stomach
37 chr11:33747000-33753000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr11:33747000-33754000 Weak transcription Stomach Smooth Muscle stomach
39 chr11:33747000-33756000 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr11:33747000-33756000 Weak transcription Fetal Stomach stomach
41 chr11:33747200-33753000 Weak transcription Brain Cingulate Gyrus brain
42 chr11:33747200-33754600 Weak transcription Spleen Spleen
43 chr11:33747200-33755200 Weak transcription Rectal Smooth Muscle rectum
44 chr11:33747200-33755400 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr11:33747200-33755600 Weak transcription Brain Hippocampus Middle brain
46 chr11:33747200-33755600 Weak transcription Brain Substantia Nigra brain
47 chr11:33747400-33754200 Weak transcription Brain Inferior Temporal Lobe brain
48 chr11:33749000-33753000 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr11:33750600-33755200 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr11:33750800-33757000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015