Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs11901852	0.82[EUR][1000 genomes]
rs12465517	0.87[CEU][hapmap]
rs1482835	0.88[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1482836	0.87[CEU][hapmap]
rs1482837	0.87[CEU][hapmap]
rs1482838	0.82[EUR][1000 genomes]
rs17012066	1.00[CEU][hapmap]
rs17012068	1.00[CEU][hapmap]
rs17012070	1.00[CEU][hapmap]
rs1840197	0.88[CEU][hapmap]
rs1840200	0.87[CEU][hapmap]
rs35374656	1.00[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41350947	1.00[CEU][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4848263	0.87[CEU][hapmap]
rs55790719	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56171708	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72847372	0.82[AMR][1000 genomes]
rs72848759	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7557008	0.87[CEU][hapmap]
rs7561882	1.00[CEU][hapmap]
rs7597341	0.87[CEU][hapmap]
rs7602098	0.87[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125580600-125591200	Weak transcription	Fetal Lung	lung

Quick Search: