Variant report

Variant	rs72847372
Chromosome Location	chr2:125566508-125566509
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11901852	0.82[EUR][1000 genomes]
rs1482835	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1482836	0.86[EUR][1000 genomes]
rs1482837	0.86[EUR][1000 genomes]
rs1482838	0.82[EUR][1000 genomes]
rs17393899	0.82[AMR][1000 genomes]
rs35374656	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs41350947	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4848263	0.99[EUR][1000 genomes]
rs55790719	0.94[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs56171708	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72847374	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72848759	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834360	chr2:125492685-125683200	Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:125566200-125568600	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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