Variant report

Variant rs17429051
Chromosome Location chr7:27386777-27386778
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27379800-27388800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr7:27384400-27387200 Enhancers Rectal Mucosa Donor 31 rectum
3 chr7:27385400-27387200 Enhancers Fetal Intestine Large intestine
4 chr7:27385600-27386800 Enhancers Sigmoid Colon Sigmoid Colon
5 chr7:27385600-27387200 Enhancers HMEC breast
6 chr7:27385600-27387400 Enhancers Fetal Lung lung
7 chr7:27385800-27386800 Enhancers Fetal Intestine Small intestine
8 chr7:27386200-27386800 Active TSS A549 lung
9 chr7:27386200-27386800 Enhancers NHDF-Ad bronchial
10 chr7:27386200-27387000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr7:27386200-27387000 Enhancers HUES48 Cell Line embryonic stem cell
12 chr7:27386200-27387000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr7:27386200-27387000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr7:27386200-27387000 Flanking Active TSS Hela-S3 cervix
15 chr7:27386200-27387200 Enhancers HUES6 Cell Line embryonic stem cell
16 chr7:27386200-27387200 Enhancers Placenta Placenta
17 chr7:27386200-27387200 Enhancers Fetal Stomach stomach
18 chr7:27386200-27387200 Enhancers Stomach Mucosa stomach
19 chr7:27386400-27386800 Enhancers HUES64 Cell Line embryonic stem cell
20 chr7:27386400-27386800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr7:27386400-27386800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
22 chr7:27386400-27386800 Active TSS Brain Anterior Caudate brain
23 chr7:27386400-27387000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr7:27386400-27387000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
25 chr7:27386400-27387000 Enhancers NHEK skin
26 chr7:27386400-27387200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr7:27386400-27387200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
28 chr7:27386400-27387200 Enhancers Adipose Nuclei Adipose
29 chr7:27386400-27387400 Enhancers Colon Smooth Muscle Colon
30 chr7:27386600-27386800 Bivalent/Poised TSS IMR90 fetal lung fibroblasts Cell Line lung
31 chr7:27386600-27386800 Active TSS Brain Inferior Temporal Lobe brain
32 chr7:27386600-27386800 Flanking Active TSS Rectal Smooth Muscle rectum
33 chr7:27386600-27386800 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr7:27386600-27387000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
35 chr7:27386600-27387000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr7:27386600-27387000 Enhancers Brain Hippocampus Middle brain
37 chr7:27386600-27387000 Active TSS Duodenum Smooth Muscle Duodenum
38 chr7:27386600-27387000 Enhancers Ovary ovary
39 chr7:27386600-27387000 Active TSS Rectal Mucosa Donor 29 rectum
40 chr7:27386600-27387200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr7:27386600-27387200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
42 chr7:27386600-27387200 Active TSS Brain Cingulate Gyrus brain
43 chr7:27386600-27387200 Enhancers HepG2 liver
44 chr7:27386600-27387800 Enhancers Pancreas Pancrea

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