Variant report

Variant rs2189239
Chromosome Location chr7:27237453-27237454
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27233000-27238200 Weak transcription Pancreas Pancrea
2 chr7:27233200-27238000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
3 chr7:27234200-27238200 Bivalent/Poised TSS Rectal Mucosa Donor 31 rectum
4 chr7:27236000-27238200 Enhancers A549 lung
5 chr7:27236400-27240200 Bivalent/Poised TSS Colon Smooth Muscle Colon
6 chr7:27236800-27238600 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
7 chr7:27237000-27239000 Bivalent/Poised TSS Osteobl bone
8 chr7:27237000-27240000 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
9 chr7:27237200-27237600 Active TSS Colonic Mucosa Colon
10 chr7:27237200-27237600 Flanking Bivalent TSS/Enh NHDF-Ad bronchial
11 chr7:27237200-27238400 Bivalent Enhancer Dnd41 blood
12 chr7:27237200-27238600 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
13 chr7:27237200-27238800 Bivalent/Poised TSS Small Intestine intestine
14 chr7:27237200-27239000 Bivalent/Poised TSS Rectal Smooth Muscle rectum
15 chr7:27237200-27240400 Bivalent/Poised TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr7:27237200-27240800 Bivalent/Poised TSS Rectal Mucosa Donor 29 rectum
17 chr7:27237400-27237600 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr7:27237400-27237600 Flanking Bivalent TSS/Enh Hela-S3 cervix
19 chr7:27237400-27238000 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin03 Skin
20 chr7:27237400-27238600 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr7:27237400-27238600 Bivalent/Poised TSS Fetal Intestine Small intestine
22 chr7:27237400-27238600 Bivalent/Poised TSS Placenta Placenta
23 chr7:27237400-27238600 Active TSS Right Atrium heart
24 chr7:27237400-27239000 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
25 chr7:27237400-27239000 Bivalent Enhancer Primary T helper 17 cells PMA-I stimulated --
26 chr7:27237400-27240200 Bivalent/Poised TSS Sigmoid Colon Sigmoid Colon

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