Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10803583	0.84[EUR][1000 genomes]
rs11900092	0.81[EUR][1000 genomes]
rs1471887	0.95[ASN][1000 genomes]
rs1492389	0.81[ASN][1000 genomes]
rs1518439	0.84[EUR][1000 genomes]
rs16843663	0.95[ASN][1000 genomes]
rs17470100	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs17476635	0.87[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs1968910	0.81[EUR][1000 genomes]
rs2129483	0.90[ASN][1000 genomes]
rs35546150	0.86[EUR][1000 genomes]
rs59982045	0.89[EUR][1000 genomes]
rs610276	0.84[EUR][1000 genomes]
rs649083	0.81[EUR][1000 genomes]
rs670617	0.81[EUR][1000 genomes]
rs72892280	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72892291	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs72894082	0.89[EUR][1000 genomes]
rs72894090	0.89[EUR][1000 genomes]
rs72896235	0.89[EUR][1000 genomes]
rs72896239	0.89[EUR][1000 genomes]
rs72896256	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834392	chr2:140920900-141086613	Flanking Active TSS Weak transcription Enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases
2	nsv431757	chr2:140931289-141098020	Enhancers Flanking Active TSS Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases
3	esv2754266	chr2:141023643-141270786	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv875185	chr2:141055080-141179257	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	nsv1002168	chr2:141056296-141157971	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
6	esv1841939	chr2:141071674-141080797	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:141077000-141080400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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